RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PHF11Q9UIL8 331 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 ANK3Q12955 4377 aaKnown RBP12.51□□□□□ -0.41
DDX39A-201ENST00000242776 STAB1Q9NY15 2570 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 ROS1P08922 2347 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 A0A1W2PR48 441 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 CRLF1O75462 422 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 EEDO75530 441 aaKnown RBP12.5□□□□□ -0.41
DDX39A-201ENST00000242776 NR2F6P10588 404 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 BUD31P41223 144 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-201ENST00000242776 NEK2P51955 445 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 RPP38P78345 283 aaKnown RBP12.5□□□□□ -0.41
DDX39A-201ENST00000242776 DEPDC1Q5TB30 811 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 HMBOX1Q6NT76 420 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 VWA1Q6PCB0 445 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 TRIM46Q7Z4K8 759 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 CPLX4Q7Z7G2 160 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 NODALQ96S42 347 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
DDX39A-201ENST00000242776 NUF2Q9BZD4 464 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 PIGMQ9H3S5 423 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 MEAF6Q9HAF1 191 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 FARSBQ9NSD9 589 aaKnown RBP12.5□□□□□ -0.41
DDX39A-201ENST00000242776 ZNF226Q9NYT6 803 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 AHSPQ9NZD4 102 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 KLRF1Q9NZS2 232 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 SLC12A4Q9UP95 1085 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 DTX4Q9Y2E6 619 aa12.5□□□□□ -0.41
DDX39A-201ENST00000242776 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 A0A1W2PNV4 684 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 PLOD2O00469 737 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 TMPRSS11DO60235 418 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 SHOX2O60902 331 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-201ENST00000242776 TNFSF13O75888 250 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 RSL1D1O76021 490 aaKnown RBP12.49□□□□□ -0.41
DDX39A-201ENST00000242776 AIFM1O95831 613 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 TGM6O95932 706 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 LINC00032P0C843 101 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 CPN1P15169 458 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 NT5EP21589 574 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 ABCD3P28288 659 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 KCNJ5P48544 419 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 TMED10P49755 219 aaKnown RBP12.49□□□□□ -0.41
DDX39A-201ENST00000242776 BTKQ06187 659 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 CUL3Q13618 768 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 ATP6AP1LQ52LC2 224 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 CYP20A1Q6UW02 462 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 SCIMPQ6UWF3 145 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 ENPP6Q6UWR7 440 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 PHC2Q8IXK0 858 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 WNT2BQ93097 391 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 TP53INP1Q96A56 240 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 METTL2AQ96IZ6 378 aaKnown RBP12.49□□□□□ -0.41
DDX39A-201ENST00000242776 HBEGFQ99075 208 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 G6PC3Q9BUM1 346 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 OSBPL11Q9BXB4 747 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 NXF5Q9H1B4 397 aaKnown RBP12.49□□□□□ -0.41
DDX39A-201ENST00000242776 OR10A5Q9H207 317 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 NPHS2Q9NP85 383 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 VPS29Q9UBQ0 182 aa12.49□□□□□ -0.41
DDX39A-201ENST00000242776 PGRMC2O15173 223 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 ICOSLGO75144 302 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 SEMA3DO95025 777 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 ABCB1P08183 1280 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-201ENST00000242776 MC3RP41968 323 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 ARFIP1P53367 373 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 MAD2L1Q13257 205 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-201ENST00000242776 BIKQ13323 160 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 SPIN4Q56A73 249 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 XKR7Q5GH72 579 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 SPDYAQ5MJ70 313 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 OR5M10Q6IEU7 315 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 IFNEQ86WN2 208 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 GALNT12Q8IXK2 581 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 UBQLNLQ8IYU4 475 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 C7orf57Q8NEG2 295 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 TUBGCP3Q96CW5 907 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 PPP3R2Q96LZ3 170 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 ZFP3Q96NJ6 502 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 ACPTQ9BZG2 426 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 TUBB1Q9H4B7 451 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 CXorf21Q9HAI6 301 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 CLCF1Q9UBD9 225 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 BCAP29Q9UHQ4 241 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 ASB4Q9Y574 426 aa12.48□□□□□ -0.41
DDX39A-201ENST00000242776 CR1P17927 2039 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 NPIPB8E9PQR5 432 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 FAM58BPP0C7Q3 252 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 SLC35E2P0CK97 266 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 POU2F1P14859 743 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 CRYGSP22914 178 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 PRPH2P23942 346 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 PIK3R1P27986 724 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 CD79BP40259 229 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 PTGDSP41222 190 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 SEC24CP53992 1094 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 AQP5P55064 265 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 HMGCS1Q01581 520 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 ACSM2AQ08AH3 577 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms