RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 RTL4Q6ZR62 310 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 BCORP1Q8N888 145 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF321PQ8N8H1 164 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SLC38A5Q8WUX1 472 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SLC47A1Q96FL8 570 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF556Q9HAH1 456 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ALKBH4Q9NXW9 302 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 DHRS12A0PJE2 317 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 H3BMH7 237 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ARPC2O15144 300 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SCN2BO60939 215 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 UTS2O95399 124 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ARAFP10398 606 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 FCGR1AP12314 374 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 HOXB6P17509 224 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ATP6V1B2P21281 511 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 IL10RAQ13651 578 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 VEZF1Q14119 521 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SELPLGQ14242 412 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 CYBRD1Q53TN4 286 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 B3GNTL1Q67FW5 361 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 DND1Q8IYX4 353 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ICA1LQ8NDH6 482 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF721Q8TF20 911 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 TMEM234Q8WY98 164 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SPACA9Q96E40 222 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SERHLQ9NQF3 203 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SIRT3Q9NTG7 399 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 PLA2G3Q9NZ20 509 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ONECUT2O95948 504 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ACP2P11117 423 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 GP1BBP13224 206 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 PCGF2P35227 344 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ALDH6A1Q02252 535 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 TRAP1Q12931 704 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 DGAT2L6Q6ZPD8 337 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 NET1Q7Z628 596 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 TOR1AIP2Q8NFQ8 470 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SMPDL3BQ92485 455 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 ASB9Q96DX5 294 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 TREX2Q9BQ50 279 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 POLE3Q9NRF9 147 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 SLC25A37Q9NYZ2 338 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 A0A1W2PNU3 283 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 G3V3Y1 287 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 GNB5O14775 395 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 PPM1BO75688 479 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 KCNK2O95069 426 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 DDAH2O95865 285 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 CCNA2P20248 432 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 EMDP50402 254 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 PNLIPRP2P54317 469 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 DTX1Q86Y01 620 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF440Q8IYI8 595 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 LGI4Q8N135 537 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 SDF2Q99470 211 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 VCX3BQ9H321 246 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 ACTR3BQ9P1U1 418 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 SLC35A3Q9Y2D2 325 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 GPR55Q9Y2T6 319 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 KLF13Q9Y2Y9 288 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 SNRNP200O75643 2136 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 DEAF1O75398 565 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 T-ENOLP0DO92 83 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 PGCP20142 388 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 FASP25445 335 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 PDZK1Q5T2W1 519 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 NDEL1Q9GZM8 345 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 REEP1Q9H902 201 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 CPNE5Q9HCH3 593 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 TMEM181Q9P2C4 612 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 TMEM8BA6NDV4 472 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 HMGN4O00479 90 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 CNOT3O75175 753 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 NKX2-2O95096 273 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 UMPSP11172 480 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 HSD17B1P14061 328 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 ETS2P15036 469 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 SOX3P41225 446 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 ARHGAP11BQ3KRB8 267 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 C16orf47Q6ZP98 133 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 BEST3Q8N1M1 668 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 OR52E4Q8NGH9 312 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 FBXO27Q8NI29 283 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 GEMIN6Q8WXD5 167 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 TEX12Q9BXU0 123 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 POMPQ9Y244 141 aa10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 TNRC6BQ9UPQ9 1833 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-201ENST00000237289 PRAMEF25A6NGN4 478 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 DPM1O60762 260 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 UGT2B17O75795 530 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 CELA2AP08217 269 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 UBL4AP11441 157 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 NAGAP17050 411 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 ABCD3P28288 659 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 PIGAP37287 484 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 OR1C1Q15619 314 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 GPR155Q7Z3F1 870 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms