RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ANKRA2Q9H9E1 313 aa20.52■□□□□ 0.88
SMARCD2-201ENST00000225742 PLEKHB1Q9UF11 243 aaPredicted RBP20.52■□□□□ 0.88
SMARCD2-201ENST00000225742 DAPP1Q9UN19 280 aa20.52■□□□□ 0.88
SMARCD2-201ENST00000225742 C19orf53Q9UNZ5 99 aaPredicted RBP20.52■□□□□ 0.88
SMARCD2-201ENST00000225742 GPR52Q9Y2T5 361 aa20.52■□□□□ 0.88
SMARCD2-201ENST00000225742 YBX2Q9Y2T7 364 aaKnown RBP20.52■□□□□ 0.88
SMARCD2-201ENST00000225742 SLC22A7Q9Y694 548 aa20.52■□□□□ 0.88
SMARCD2-201ENST00000225742 A0A1W2PQF6 199 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 CPMP14384 443 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 HTR1FP30939 366 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 SLC1A3P43003 542 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 RPS25P62851 125 aaKnown RBP20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 EEF1A1P68104 462 aaKnown RBP20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 MLLT1Q03111 559 aaPredicted RBP20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 RUNX2Q13950 521 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 PRRT3Q5FWE3 981 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 OR2G6Q5TZ20 316 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 AGAP6Q5VW22 663 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 NXNL2Q5VZ03 156 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 ZCCHC12Q6PEW1 402 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 LAX1Q8IWV1 398 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 NRMQ8IXM6 262 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 RNF113BQ8IZP6 322 aaKnown RBP20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 GDPD1Q8N9F7 314 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 OR52N1Q8NH53 320 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 GATAD2BQ8WXI9 593 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 TM9SF4Q92544 642 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 AGAP4Q96P64 663 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 SLC6A17Q9H1V8 727 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 C14orf119Q9NWQ9 140 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 SATB2Q9UPW6 733 aa20.51■□□□□ 0.87
SMARCD2-201ENST00000225742 A0A087WV62 115 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 A6NCN8 305 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 SCAMP1O15126 338 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 IGHA1P01876 353 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 DBIP07108 87 aaKnown RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 NDUFV2P19404 249 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 RPS4Y1P22090 263 aaKnown RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 AK4P27144 223 aaPredicted RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 HNRNPA0Q13151 305 aaKnown RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 LRIT3Q3SXY7 679 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 GLYR1Q49A26 553 aaPredicted RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 CRTC2Q53ET0 693 aaPredicted RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 DDI2Q5TDH0 399 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 MEX3DQ86XN8 651 aaKnown RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 KLHL36Q8N4N3 616 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 SCAIQ8N9R8 606 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 OR2T33Q8NG76 320 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 BRIX1Q8TDN6 353 aaKnown RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 SIPA1Q96FS4 1042 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 SDF2Q99470 211 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 MIR1-1HGQ9H1L0 117 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 C6orf106Q9H6K1 298 aaPredicted RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 MOV10Q9HCE1 1003 aaKnown RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 PILRAQ9UKJ1 303 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 SPACA6W5XKT8 324 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 THY1P04216 161 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 UGT2B7P16662 529 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 COL9A1P20849 921 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 MAGP20916 626 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 SCN1BQ07699 218 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF79Q15937 498 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF628Q5EBL2 1059 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 CLEC12AQ5QGZ9 265 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 ARMC4Q5T2S8 1044 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 FHL5Q5TD97 284 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF544Q6NX49 715 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 FIGLAQ6QHK4 219 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF619Q8N2I2 560 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 COL26A1Q96A83 441 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 RPP25Q9BUL9 199 aaKnown RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF350Q9GZX5 532 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 H2AFY2Q9P0M6 372 aaPredicted RBP20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 MUTYHQ9UIF7 546 aa20.5■□□□□ 0.87
SMARCD2-201ENST00000225742 TRAPPC13A5PLN9 417 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 AKAP8O43823 692 aaKnown RBP20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 FMO6PO60774 539 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 KLF8O95600 359 aaPredicted RBP20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 AK1P00568 194 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 GALP22466 123 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 ACTR1BP42025 376 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 CLDN2P57739 230 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 ACTR1AP61163 376 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 DUSP5Q16690 384 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 MANEAQ5SRI9 462 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 FCRL6Q6DN72 434 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 SLC30A6Q6NXT4 461 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 PRR23CQ6ZRP0 262 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 GID4Q8IVV7 300 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 FCRL4Q96PJ5 515 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 STACQ99469 402 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 TPK1Q9H3S4 243 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 ABCB9Q9NP78 766 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 ASB6Q9NWX5 421 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 ACTR10Q9NZ32 417 aa20.49■□□□□ 0.87
SMARCD2-201ENST00000225742 SEC14L5O43304 696 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 STX11O75558 287 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 IL7P13232 177 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 EN2P19622 333 aaPredicted RBP20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 SDC2P34741 201 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms