RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TRHRP34981 398 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF136P52737 540 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 BTG2P78543 158 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 KCNAB1Q14722 419 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 GPR68Q15743 365 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 MAPK14Q16539 360 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 SYT16Q17RD7 645 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ZSWIM7Q19AV6 140 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 PLK5Q496M5 336 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 OR4C6Q8NH72 309 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 FAR1Q8WVX9 515 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF768Q9H5H4 540 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ARMC7Q9H6L4 198 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 KCNE5Q9UJ90 142 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 TNRC6BQ9UPQ9 1833 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 GXYLT2A0PJZ3 443 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 CDHR4A6H8M9 788 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 CLCA1A8K7I4 914 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 FRS3O43559 492 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 PDGFBP01127 241 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 CNR2P34972 360 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 GSSP48637 474 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 COL9A2Q14055 689 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 AMZ1Q400G9 498 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 TMEM201Q5SNT2 666 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 SYT6Q5T7P8 510 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 GPR107Q5VW38 600 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 PLEKHM3Q6ZWE6 761 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 RANBP3LQ86VV4 465 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 NLGN4XQ8N0W4 816 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 Q8N9G6 341 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 FAM181AQ8N9Y4 354 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 OR7G1Q8NGA0 311 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 OR1L3Q8NH93 324 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 GNPDA2Q8TDQ7 276 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 SAP25Q8TEE9 199 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 ACOT11Q8WXI4 607 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 MYDGFQ969H8 173 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 SLC35B4Q969S0 331 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 CCDC74AQ96AQ1 378 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 C12orf43Q96C57 262 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 FBXO34Q9NWN3 711 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 NINQ8N4C6 2090 aa13.29□□□□□ -0.28
RTFDC1-201ENST00000023939 CENPVL1A0A0U1RR11 272 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 CPSF4LA6NMK7 179 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 H3BMQ9 156 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 LAMTOR5O43504 91 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 MT-ND2P03891 347 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 PCSK6P29122 969 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 SEPHS1P49903 392 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 DSG2Q14126 1118 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 ERV3-1Q14264 604 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 NR0B2Q15466 257 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 SLC25A30Q5SVS4 291 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 TMEM71Q6P5X7 295 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 QSOX2Q6ZRP7 698 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 GDF7Q7Z4P5 450 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 GRAMD2AQ8IUY3 354 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 MAML2Q8IZL2 1156 aaPredicted RBP13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF615Q8N8J6 731 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 RAB2BQ8WUD1 216 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 FCGR1BQ92637 280 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 RORBQ92753 470 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 SLC41A3Q96GZ6 507 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 COG8Q96MW5 612 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 BCL7BQ9BQE9 202 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 CCDC90BQ9GZT6 254 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 NECTIN3Q9NQS3 549 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 CNOT2Q9NZN8 540 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 SERTAD3Q9UJW9 196 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 PCDH15Q96QU1 1955 aa13.28□□□□□ -0.28
RTFDC1-201ENST00000023939 IGKV3D-11A0A0A0MRZ8 115 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 LY6G6EA0A0G2JKS1 128 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 DSCR3O14972 297 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 HYAL3O43820 417 aaPredicted RBP13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 CDC123O75794 336 aaPredicted RBP13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 THY1P04216 161 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 ANKRD34CP0C6C1 535 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 FOLR1P15328 257 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 MAOAP21397 527 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 DRD5P21918 477 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 SSTR4P31391 388 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 HOXD12P35452 270 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 PEX19P40855 299 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 OMPP47874 163 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 MASP1P48740 699 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 GP2P55259 537 aaKnown RBP13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 TSPAN31Q12999 210 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF267Q14586 743 aaPredicted RBP13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF141Q15928 474 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 MRPL2Q5T653 305 aaKnown RBP13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 TMEM236Q5W0B7 351 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 FIGNL1Q6PIW4 674 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 TTLL10Q6ZVT0 673 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 PTCHD4Q6ZW05 846 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 AHSA2Q719I0 299 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 GPR135Q8IZ08 494 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 PIGXQ8TBF5 258 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 OIT3Q8WWZ8 545 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 GGHQ92820 318 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms