RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ZMYND19Q96E35 227 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 MALSU1Q96EH3 234 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 CNN2Q99439 309 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 CRYM-AS1A6NIL9 109 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 SLC6A11P48066 632 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 EDDM3AQ14507 147 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 ASF1BQ9NVP2 202 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 SLC23A2Q9UGH3 650 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 RNF6Q9Y252 685 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 PAHP00439 452 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 GSK3BP49841 420 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 TXNDC15Q96J42 360 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 XPNPEP1Q9NQW7 623 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 PRAMEF11O60813 436 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 CER1O95813 267 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 F11P03951 625 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 RAD52P43351 418 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 LGALS4P56470 323 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 BEST3Q8N1M1 668 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 SLC5A8Q8N695 610 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 RTP3Q9BQQ7 232 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 POLHQ9Y253 713 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 ATP6V1G1O75348 118 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 HLA-DPB1P04440 258 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 ETFAP13804 333 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 DLSTP36957 453 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 EDDM3BP56851 147 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 DPY19L1Q2PZI1 675 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 DCAF4L2Q8NA75 395 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 TAAR8Q969N4 342 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 ZNF599Q96NL3 588 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 TMEM59Q9BXS4 323 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 RGS9O75916 674 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 SNAI1O95863 264 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 CD34P28906 385 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 CHPT1Q8WUD6 406 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 TSPAN10Q9H1Z9 355 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 NFKBIEO00221 500 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 TOR1AO14656 332 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 BET1O15155 118 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 GRPP07492 148 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 PET100P0DJ07 73 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 DRD5P21918 477 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 SNRPD2P62316 118 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 PSAPL1Q6NUJ1 521 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 OR5AK2Q8NH90 309 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 DCUN1D4Q92564 292 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 CNIH4Q9P003 139 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 IGLV3-22A0A075B6J6 115 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 LGALS8O00214 317 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 LYPLA2O95372 231 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 FZD8Q9H461 694 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 LUZP4Q9P127 313 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 ANKMY1Q9P2S6 941 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 EFSO43281 561 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 OR5AS1Q8N127 324 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 SAMD8Q96LT4 415 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 ZNF578Q96N58 590 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 H3BSA7 217 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 IFNA1P01562 189 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 CALCBP10092 127 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 ZNF791Q3KP31 576 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 SLC22A6Q4U2R8 563 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 RTP2Q5QGT7 225 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 TMEM104Q8NE00 496 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 CREB3L1Q96BA8 519 aa16.9■□□□□ 0.3
CACNA1A-227ENST00000636549 SHISA7A6NL88 538 aa16.89■□□□□ 0.3
CACNA1A-227ENST00000636549 PTGIRP43119 386 aa16.89■□□□□ 0.3
CACNA1A-227ENST00000636549 DEFB103AP81534 67 aa16.89■□□□□ 0.3
CACNA1A-227ENST00000636549 ARHGAP19Q14CB8 494 aa16.89■□□□□ 0.3
CACNA1A-227ENST00000636549 ZNF678Q5SXM1 525 aa16.89■□□□□ 0.3
CACNA1A-227ENST00000636549 KIAA1614Q5VZ46 1190 aa16.89■□□□□ 0.3
CACNA1A-227ENST00000636549 STEAP4Q687X5 459 aa16.89■□□□□ 0.3
CACNA1A-227ENST00000636549 DAZAP1Q96EP5 407 aaKnown RBP16.89■□□□□ 0.3
CACNA1A-227ENST00000636549 MC3RP41968 323 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 CNPY1Q3B7I2 92 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 GSG1LQ6UXU4 331 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 ZSWIM9Q86XI8 627 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 BANPQ8N9N5 519 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 SLC41A3Q96GZ6 507 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 ARMC1Q9NVT9 282 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 STUB1Q9UNE7 303 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 PUS1Q9Y606 427 aaKnown RBP eCLIP16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 MTHFD2P13995 350 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 AGTR1P30556 359 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 GPR17Q13304 367 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 OR7G1Q8NGA0 311 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 PPP1R35Q8TAP8 253 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 NUMA1Q14980 2115 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 CNIH1O95406 144 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 CD46P15529 392 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 CDKN2DP55273 166 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 NXPE4Q6UWF7 544 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 FAM57BQ71RH2 274 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 TRILQ7L0X0 811 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 PEBP4Q96S96 227 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 IFNA4P05014 189 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 TPOP07202 933 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 EBLN1P0CF75 366 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms