RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CR1P17927 2039 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CASTP20810 708 aaKnown RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 RPS12P25398 132 aaKnown RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ELK3P41970 407 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 MAGEA9P43362 315 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ACADSBP45954 432 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 IER3P46695 156 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FNTAP49354 379 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FHITP49789 147 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 GSK3BP49841 420 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SMSP52788 366 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 GEMP55040 296 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CCL23P55773 120 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 RAG2P55895 527 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 IRX3P78415 501 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CACNA1DQ01668 2161 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PRKCEQ02156 737 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SPP2Q13103 211 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PPIL2Q13356 520 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC17A1Q14916 467 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 HEPACAMQ14CZ8 416 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 WDR43Q15061 677 aaKnown RBP eCLIP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 P2RY14Q15391 338 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TAF7Q15545 349 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CARTPTQ16568 116 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 WSCD2Q2TBF2 565 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TIMM50Q3ZCQ8 353 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 KBTBD12Q3ZCT8 623 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM133BQ5BKY9 247 aaKnown RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ATAD3CQ5T2N8 411 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FHL5Q5TD97 284 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 AGAP6Q5VW22 663 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 DMKNQ6E0U4 476 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TATDN1Q6P1N9 297 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 Q6ZR54 194 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 Q6ZRG5 221 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 KCTD9Q7L273 389 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 OTOAQ7RTW8 1153 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 NUFIP2Q7Z417 695 aaKnown RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 DEFB128Q7Z7B8 93 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ADGRD2Q7Z7M1 963 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ASPGQ86U10 573 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 LUZP1Q86V48 1076 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SERINC5Q86VE9 423 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CARM1Q86X55 608 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 IQCA1Q86XH1 822 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CACUL1Q86Y37 369 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CCDC71Q8IV32 467 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 NAXDQ8IW45 347 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PRR22Q8IZ63 422 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM9BQ8IZU0 186 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 LINC00518Q8N0U6 118 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC22A18ASQ8N1D0 253 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FBXW8Q8N3Y1 598 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM133AQ8N9E0 248 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ATAD1Q8NBU5 361 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 BEST4Q8NFU0 473 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 OR7G3Q8NG95 312 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 OR6T1Q8NGN1 323 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 OR52J3Q8NH60 311 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 C8orf46Q8TAG6 207 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 GDAP1Q8TB36 358 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ST7LQ8TDW4 575 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TBCKQ8TEA7 893 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 UBTD2Q8WUN7 234 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CORO2AQ92828 525 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 MR1Q95460 341 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM46BQ96A09 425 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CFAP36Q96G28 342 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PPP1R16AQ96I34 528 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CYYR1Q96J86 154 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PANX3Q96QZ0 392 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 AGPAT1Q99943 283 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 MAPKAP1Q9BPZ7 522 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CCM2Q9BSQ5 444 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FUNDC2Q9BWH2 189 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC5A7Q9GZV3 580 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 WWP1Q9H0M0 922 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 DPEP3Q9H4B8 488 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TMEM206Q9H813 350 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 AKIRIN1Q9H9L7 192 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 RNPEPL1Q9HAU8 725 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 IL1RL2Q9HB29 575 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC25A19Q9HC21 320 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 IL1RAPL2Q9NP60 686 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 GPR173Q9NS66 373 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ABCC13Q9NSE7 274 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SLCO1C1Q9NYB5 712 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 NDUFA13Q9P0J0 144 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 RCOR3Q9P2K3 495 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ERVK-18Q9QC07 812 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TRPC4Q9UBN4 977 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 DNAJB9Q9UBS3 223 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PRODH2Q9UF12 536 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TEKT2Q9UIF3 430 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PSORS1C1Q9UIG5 152 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 MRTO4Q9UKD2 239 aaKnown RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CDH7Q9ULB5 785 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 STX8Q9UNK0 236 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 KCNK6Q9Y257 313 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms