RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ZNF419Q96HQ0 510 aaPredicted RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 DGAT2Q96PD7 388 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 MICU1Q9BPX6 476 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 PIGMQ9H3S5 423 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 GAPDHSO14556 408 aaPredicted RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 LATS1O95835 1130 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 ADRB1P08588 477 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 LAMP1P11279 417 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 JUNDP17535 347 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 BDKRB2P30411 391 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 CHAF1BQ13112 559 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 RBMS2Q15434 407 aaKnown RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 SMN1Q16637 294 aaKnown RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 FUT10Q6P4F1 479 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 SHFQ7M4L6 423 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 DCAF4L2Q8NA75 395 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 WFIKKN2Q8TEU8 576 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 EPHA6Q9UF33 1036 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 RPH3AQ9Y2J0 694 aaPredicted RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 C4AP0C0L4 1744 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 C4BP0C0L5 1744 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 RAF1P04049 648 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 NOGQ13253 232 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 MINDY4Q4G0A6 757 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 TREML2Q5T2D2 321 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 USP50Q70EL3 339 aaPredicted RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 ZER1Q7Z7L7 766 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 LSMEM2Q8N112 164 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 MTMR14Q8NCE2 650 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 OR5H2Q8NGV7 314 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 DYNC2LI1Q8TCX1 351 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 MAL2Q969L2 176 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 ZNF566Q969W8 418 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 SLC41A3Q96GZ6 507 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 GPR52Q9Y2T5 361 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 NRXN3Q9Y4C0 1643 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 EFCAB7A8K855 629 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 CLUP10909 449 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 ARSDP51689 593 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 ARHGAP1Q07960 439 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 MGAT3Q09327 533 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 DOC2AQ14183 400 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 PRAMEF19Q5SWL8 479 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 PRSS55Q6UWB4 352 aaPredicted RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 VASH1Q7L8A9 365 aaPredicted RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 GALNT10Q86SR1 603 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 LRRTM4Q86VH4 590 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 PROKR1Q8TCW9 393 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 PGAP3Q96FM1 320 aaPredicted RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 NTMT1Q9BV86 223 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 BABAM2Q9NXR7 383 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 KIF25Q9UIL4 384 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 FAM230AA0A1W2PPH8 454 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 CASC3O15234 703 aaKnown RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 ACPPP15309 386 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 CAP1Q01518 475 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 AAK1Q2M2I8 961 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 TSSK4Q6SA08 328 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 GPAT4Q86UL3 456 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 OR13C3Q8NGS6 347 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 KLRG1Q96E93 195 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 C16orf58Q96GQ5 468 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 SYT3Q9BQG1 590 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 PINK1Q9BXM7 581 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 PRDM9Q9NQV7 894 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 C19orf12Q9NSK7 152 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 MRPS23Q9Y3D9 190 aaKnown RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 PCDHGA2Q9Y5H1 932 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 TIAM2Q8IVF5 1701 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 KIF13BQ9NQT8 1826 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 POM121CA8CG34 1229 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 TOR1AO14656 332 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 MAS1P04201 325 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 EPHX1P07099 455 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 GPR4P46093 362 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 RIDAP52758 137 aaKnown RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 TAS2R19P59542 299 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 TCTE3Q8IZS6 198 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 STEAP2Q8NFT2 490 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 C16orf78Q8WTQ4 265 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 RNF141Q8WVD5 230 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 ACOT11Q8WXI4 607 aaPredicted RBP8.45□□□□□ -1.06
VCL-206ENST00000623461 SLC19A3Q9BZV2 496 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 MINDY3Q9H8M7 445 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 GALNT9Q9HCQ5 603 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 OSGIN1Q9UJX0 560 aa8.45□□□□□ -1.06
VCL-206ENST00000623461 ZNF736B4DX44 427 aaPredicted RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 MUSKO15146 869 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 PTHP01270 115 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 INHAP05111 366 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 PSMD8P48556 350 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 FPGSQ05932 587 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 CHADLQ6NUI6 762 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 CRTC1Q6UUV9 634 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 APOOLQ6UXV4 268 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 SLC35F2Q8IXU6 374 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 GPR135Q8IZ08 494 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 OR4C15Q8NGM1 316 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 APIPQ96GX9 242 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 DCLRE1CQ96SD1 692 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms