RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 IGF2RP11717 2491 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 PTPRQQ9UMZ3 2332 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 TRAV17A0A0B4J275 112 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 PRAMEF27A3QJZ7 478 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 TMEM247A6NEH6 219 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 K7EM74 188 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 UGT2B11O75310 529 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 STX11O75558 287 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 ATP5HO75947 161 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 IGKV1D-16P01601 117 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 PDGFAP04085 211 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 SP1P08047 785 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 NGFRP08138 427 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 CD46P15529 392 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 CNR1P21554 472 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 IL12BP29460 328 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 PSME3P61289 254 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 RBBP4Q09028 425 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 BNIP1Q12981 228 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 SNTA1Q13424 505 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 OR1C1Q15619 314 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 ADRM1Q16186 407 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 NNATQ16517 81 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 LACTB2Q53H82 288 aaPredicted RBP11.46□□□□□ -0.57
LINC00963-216ENST00000623185 DCST2Q5T1A1 773 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 PRAMEF8Q5VWM4 474 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 PRAMEF7Q5VXH5 474 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 SLC25A25Q6KCM7 469 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 C16orf89Q6UX73 402 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 LRRC74BQ6ZQY2 392 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 Q6ZS92 163 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 C16orf62Q7Z3J2 963 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 NET1Q7Z628 596 aaPredicted RBP11.46□□□□□ -0.57
LINC00963-216ENST00000623185 CALHM3Q86XJ0 350 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 PRR22Q8IZ63 422 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 CYP4Z2PQ8N1L4 340 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 MDS2Q8NDY4 140 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 CATSPER1Q8NEC5 780 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 SPPL2AQ8TCT8 520 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 SLC38A5Q8WUX1 472 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 OIT3Q8WWZ8 545 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 HGDQ93099 445 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 NTNG2Q96CW9 530 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 RMND5BQ96G75 393 aaPredicted RBP11.46□□□□□ -0.57
LINC00963-216ENST00000623185 ZNF583Q96ND8 569 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 SLC39A3Q9BRY0 314 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.46□□□□□ -0.577e-7■■■■□ 23.6
LINC00963-216ENST00000623185 A4GALTQ9NPC4 353 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 TIMMDC1Q9NPL8 285 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 UBQLN4Q9NRR5 601 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 ANKRD10Q9NXR5 420 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 CALML5Q9NZT1 146 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.46□□□□□ -0.57
LINC00963-216ENST00000623185 P2RX2Q9UBL9 471 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 TP53TG5Q9Y2B4 290 aa11.46□□□□□ -0.57
LINC00963-216ENST00000623185 CHCHD2Q9Y6H1 151 aaPredicted RBP11.46□□□□□ -0.57
LINC00963-216ENST00000623185 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.58
LINC00963-216ENST00000623185 CFAP47Q6ZTR5 3102 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 ACACBO00763 2458 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 A0A0G2JPF8 293 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 HNRNPCL2B2RXH8 293 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 HNRNPCL3B7ZW38 293 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 HS6ST1O60243 411 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 FCMRO60667 390 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 HNRNPCL1O60812 293 aaKnown RBP11.45□□□□□ -0.58
LINC00963-216ENST00000623185 UBOX5O94941 541 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 HNRNPCL4P0DMR1 293 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 NR2F1P10589 423 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 ATP6V1C1P21283 382 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 TBXA2RP21731 343 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 CPOXP36551 454 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 CPA2P48052 419 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 ATP12AP54707 1039 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 FBXW4P57775 412 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 MTPNP58546 118 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 SELPLGQ14242 412 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 ZNF630Q2M218 657 aaPredicted RBP11.45□□□□□ -0.58
LINC00963-216ENST00000623185 SPATS1Q496A3 300 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 RABL3Q5HYI8 236 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 TBCELQ5QJ74 424 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 RPUSD3Q6P087 351 aaKnown RBP11.45□□□□□ -0.58
LINC00963-216ENST00000623185 FIGNL1Q6PIW4 674 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 MDGA2Q7Z553 956 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 SLC30A8Q8IWU4 369 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 PGAM4Q8N0Y7 254 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 RBMXL3Q8N7X1 1067 aaKnown RBP11.45□□□□□ -0.58
LINC00963-216ENST00000623185 OR4C3Q8NH37 302 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 OR10A6Q8NH74 314 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 FBXO30Q8TB52 745 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 RNF138Q8WVD3 245 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 EFHD2Q96C19 240 aaPredicted RBP11.45□□□□□ -0.58
LINC00963-216ENST00000623185 OTUB1Q96FW1 271 aaPredicted RBP11.45□□□□□ -0.58
LINC00963-216ENST00000623185 SCMH1Q96GD3 660 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 SIGLEC12Q96PQ1 595 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 ANGPTL4Q9BY76 406 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 ZNF350Q9GZX5 532 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 HHATLQ9HCP6 504 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 BCL2L10Q9HD36 194 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 FBXO34Q9NWN3 711 aa11.45□□□□□ -0.58
LINC00963-216ENST00000623185 CMTM6Q9NX76 183 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms