RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 ZFAND2BQ8WV99 257 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 GEMIN6Q8WXD5 167 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 G6PC3Q9BUM1 346 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 NUDT9Q9BW91 350 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 ITPAQ9BY32 194 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 VCX3BQ9H321 246 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CACYBPQ9HB71 228 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CDV3Q9UKY7 258 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CBLCQ9ULV8 474 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FRG2CA6NGY1 282 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 C21orf140B9A014 251 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 STMND1H3BQB6 276 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 UMODP07911 640 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 PABPC4LP0CB38 370 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 ITGA2P17301 1181 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 CD247P20963 164 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 RPS15P62841 145 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 KCNC4Q03721 635 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 EBPQ15125 230 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 HLA-DQA1Q5Y7H0 255 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 HMBOX1Q6NT76 420 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 TMEM154Q6P9G4 183 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 NPSR1Q6W5P4 371 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 TMPRSS7Q7RTY8 843 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 ZNF619Q8N2I2 560 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 APCDD1LQ8NCL9 501 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 OR10Q1Q8NGQ4 319 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 OR8K3Q8NH51 312 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 PROX1Q92786 737 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 ADIPOR1Q96A54 375 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 RMND5BQ96G75 393 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 VMP1Q96GC9 406 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 LCORQ96JN0 433 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 C7orf34Q96L11 122 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 ZNF354BQ96LW1 612 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 WDR77Q9BQA1 342 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 GPR87Q9BY21 358 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 DNAJB9Q9UBS3 223 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 MRTO4Q9UKD2 239 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 MKLN1Q9UL63 735 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 ZNF232Q9UNY5 417 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 OR10H1Q9Y4A9 318 aa13.18□□□□□ -0.3
CLTCL1-212ENST00000622493 IGHV3-20A0A0C4DH32 117 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 A0A1W2PQ72 361 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 GXYLT2A0PJZ3 443 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 ENO4A6NNW6 628 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 SYT5O00445 386 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 KIAA0513O60268 411 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 GFRA3O60609 400 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 DPM1O60762 260 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 PRSS23O95084 383 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 ZIC2O95409 532 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 CST1P01037 141 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 THBS1P07996 1170 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 MMP11P24347 488 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 PRKAR1BP31321 381 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 GABREP78334 506 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 ROR2Q01974 943 aaKnown RBP13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 ZNF311Q5JNZ3 666 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 OGFRL1Q5TC84 451 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 IGF2-ASQ6U949 168 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 AMIGO2Q86SJ2 522 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 C9orf40Q8IXQ3 194 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 CATSPER1Q8NEC5 780 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 OR52P1PQ8NH57 321 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 CT55Q8WUE5 264 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 NRG4Q8WWG1 115 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 OIT3Q8WWZ8 545 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 PINK1Q9BXM7 581 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 PAPOLBQ9NRJ5 636 aaKnown RBP13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 THSD1Q9NS62 852 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 FARSAQ9Y285 508 aaKnown RBP13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 SH3GLB1Q9Y371 365 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 GVINP1Q7Z2Y8 2422 aa13.17□□□□□ -0.3
CLTCL1-212ENST00000622493 FAM149AA5PLN7 773 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 TO15178 435 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 ACOX3O15254 700 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 PEX1O43933 1283 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 DBIP07108 87 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 IL7RP16871 459 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 RBMS1P29558 406 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 PSMD4P55036 377 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 SLC26A5P58743 744 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 VLDLRP98155 873 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 SSPNQ14714 243 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 LARS2Q15031 903 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 GPR68Q15743 365 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 DECR1Q16698 335 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 FIGNL1Q6PIW4 674 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 DHRS4L2Q6PKH6 230 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 HSDL2Q6YN16 418 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 GPR32P1Q8NGA4 272 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 NUBPLQ8TB37 319 aa13.16□□□□□ -0.3
CLTCL1-212ENST00000622493 APOBEC4Q8WW27 367 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms