RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ISG20L2Q9H9L3 353 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 SLCO1C1Q9NYB5 712 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 EIF3KQ9UBQ5 218 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 ZFR2Q9UPR6 939 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 KCNE3Q9Y6H6 103 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 A0A0G2JPF8 293 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 C7orf66A4D0T2 115 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 HNRNPCL2B2RXH8 293 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 HNRNPCL3B7ZW38 293 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 PPM1DO15297 605 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 PRKRAO75569 313 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 SLC22A5O76082 557 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 HNRNPCL4P0DMR1 293 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 CCR2P41597 374 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 NCBP2P52298 156 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 LASP1Q14847 261 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 C11orf96Q7Z7L8 435 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 SIRT6Q8N6T7 355 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 PIGXQ8TBF5 258 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 ZNF431Q8TF32 576 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 SCMH1Q96GD3 660 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 ABCG5Q9H222 651 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 GHITMQ9H3K2 345 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 NARFLQ9H6Q4 476 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 SPHK2Q9NRA0 654 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 ENAMQ9NRM1 1142 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 ADAM29Q9UKF5 820 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 SIRT4Q9Y6E7 314 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 A0A0A6YYD5 115 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 H7BY64 318 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 SOCS6O14544 535 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 SLC2A10O95528 541 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 ALDH1A1P00352 501 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 CXCL10P02778 98 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 THBS2P35442 1172 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 GPR1P46091 355 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 CCR8P51685 355 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 PGGHGQ32M88 737 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 CCNJQ5T5M9 372 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 PIP5KL1Q5T9C9 394 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 NDUFAF5Q5TEU4 345 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 TEX261Q6UWH6 196 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 DCUN1D3Q8IWE4 304 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 OSTF1Q92882 214 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 NUS1Q96E22 293 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 PRAP1Q96NZ9 151 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 PPIL3Q9H2H8 161 aaKnown RBP18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 OSGEPL1Q9H4B0 414 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 SLC35C2Q9NQQ7 365 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 PTGFRNQ9P2B2 879 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 KCNN3Q9UGI6 736 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 MGAT4AQ9UM21 535 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 ING4Q9UNL4 249 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 PRKAB1Q9Y478 270 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 AUP1Q9Y679 476 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 CACNG2Q9Y698 323 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 U3KQ87 197 aa18.33■□□□□ 0.53
PDLIM3-212ENST00000620787 MYO10Q9HD67 2058 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 J3QRE1 110 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 NNMTP40261 264 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 RFX3P48380 749 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 LY6G5CQ5SRR4 150 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 IDO2Q6ZQW0 420 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 LRRC17Q8N6Y2 441 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 LRIG1Q96JA1 1093 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 EMC7Q9NPA0 242 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 MED17Q9NVC6 651 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 IL20Q9NYY1 176 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 MARK1Q9P0L2 795 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 TNFRSF10DQ9UBN6 386 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 SRRDQ9UH36 339 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 SATB2Q9UPW6 733 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 CSNK1G3Q9Y6M4 447 aa18.33■□□□□ 0.52
PDLIM3-212ENST00000620787 SYT5O00445 386 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 NFATC1O95644 943 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 HMGN2P05204 90 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 ALPPL2P10696 532 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 AHCYP23526 432 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 FPR3P25089 353 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 RBMS1P29558 406 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 TRHRP34981 398 aaPredicted RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 STAT5AP42229 794 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 TAS2R38P59533 333 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 TMCO2Q7Z6W1 182 aaPredicted RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF514Q96K75 400 aaPredicted RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 AICDAQ9GZX7 198 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 POLMQ9NP87 494 aaPredicted RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 HINT3Q9NQE9 182 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 CHST2Q9Y4C5 530 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 TRAV6A0A075B6T7 132 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 KPNA3O00505 521 aaPredicted RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 DRD2P14416 443 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 STOMP27105 288 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 ATP6V1E1P36543 226 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 GPR4P46093 362 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 RAB8AP61006 207 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 BDH1Q02338 343 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 ST3GAL3Q11203 375 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 GNA13Q14344 377 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 ARHGAP15Q53QZ3 475 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms