RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TRIM15Q9C019 465 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 SAP130Q9H0E3 1048 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 NXF5Q9H1B4 397 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 SLC38A1Q9H2H9 487 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 POLE3Q9NRF9 147 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 DCAF13Q9NV06 445 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 MYOTQ9UBF9 498 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 DKK4Q9UBT3 224 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 FBXL4Q9UKA2 621 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 MRTO4Q9UKD2 239 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CBLCQ9ULV8 474 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 ANGPT4Q9Y264 503 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 RRP15Q9Y3B9 282 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 OR10H1Q9Y4A9 318 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CFAP54Q96N23 3096 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CROCCQ5TZA2 2017 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 FER1L5A0AVI2 2057 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 TCRBV3S1A0A5B6 114 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 CDC14CA4D256 554 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 NKX2-8O15522 239 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 EFSO43281 561 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 TLX3O43711 291 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 SERPINB7O75635 380 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 PDE9AO76083 593 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 MFN2O95140 757 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ZIC2O95409 532 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 H6PDO95479 791 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 IL33O95760 270 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 IGKV1D-16P01601 117 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 SERPINA7P05543 415 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 CELA2AP08217 269 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 UMPSP11172 480 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 NAGAP17050 411 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ATP6V1B2P21281 511 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 AQP1P29972 269 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 LCN1P31025 176 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 AP2B1P63010 937 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ELF3P78545 371 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 RHDQ02161 417 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 Q0VFX4 171 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ATP1A4Q13733 1029 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 CCNIQ14094 377 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 DECR1Q16698 335 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 MTX3Q5HYI7 312 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 CCNJQ5T5M9 372 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 TYW3Q6IPR3 259 aaKnown RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 TCTN3Q6NUS6 607 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 H3F3CQ6NXT2 135 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 FIGNL1Q6PIW4 674 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 CBLL1Q75N03 491 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 EIF3MQ7L2H7 374 aaKnown RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 OLIG3Q7RTU3 272 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 KRT73Q86Y46 540 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 KBTBD2Q8IY47 623 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 TAGAPQ8N103 731 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ARMC10Q8N2F6 343 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 SLC15A4Q8N697 577 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 BCORP1Q8N888 145 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 GOLM1Q8NBJ4 401 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF248Q8NDW4 579 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 BHLHE22Q8NFJ8 381 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 SNIP1Q8TAD8 396 aaKnown RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 BBS10Q8TAM1 723 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 KCNE4Q8WWG9 221 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 FAM162AQ96A26 154 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ZG16BQ96DA0 208 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 RMND5BQ96G75 393 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF607Q96SK3 696 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 G6PC3Q9BUM1 346 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 SPATA5L1Q9BVQ7 753 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF350Q9GZX5 532 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 RUBCNLQ9H714 662 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 LIN28AQ9H9Z2 209 aaKnown RBP7.41□□□□□ -1.22
CPNE3-209ENST00000620393 ATP13A2Q9NQ11 1180 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 OLAHQ9NV23 265 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 FBXO34Q9NWN3 711 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 MKLN1Q9UL63 735 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 WDR45Q9Y484 360 aa7.41□□□□□ -1.22
CPNE3-209ENST00000620393 SDK2Q58EX2 2172 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 TCRBV5S2A0A599 114 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 AGAP5A6NIR3 686 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF891A8MT65 544 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 A8MUI8 341 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 TMEM229AB2RXF0 380 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 NPIPB9F8W1W9 429 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 H0YHG0 523 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 MASP2O00187 686 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 WWP2O00308 870 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 KLK10O43240 276 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 TSPAN2O60636 221 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 ENTPD5O75356 428 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 REM1O75628 298 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 NADKO95544 446 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SERPINA1P01009 418 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 C8BP07358 591 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 ITGAMP11215 1152 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 WT1P19544 449 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 ATP6V1C1P21283 382 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CRYBA2P53672 197 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 PNLIPRP2P54317 469 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms