RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SLC1A3P43003 542 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 HYAL4Q2M3T9 481 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 PAN3Q58A45 887 aaKnown RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 HIST2H2AA3Q6FI13 130 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 NHLRC1Q6VVB1 395 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 TMPRSS9Q7Z410 1059 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 MMP21Q8N119 569 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 LINC01465Q8N7H1 131 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 SMAP2Q8WU79 429 aaPredicted RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 CNOT9Q92600 299 aaKnown RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 WDR89Q96FK6 387 aaPredicted RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 TMEM19Q96HH6 336 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 SCLYQ96I15 445 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 SAMD11Q96NU1 681 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 TRIB3Q96RU7 358 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 QRSL1Q9H0R6 528 aaKnown RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR51I1Q9H343 314 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 FBXO44Q9H4M3 255 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 AUNIPQ9H7T9 357 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 DDX31Q9H8H2 851 aaKnown RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 CACYBPQ9HB71 228 aaKnown RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 KCMF1Q9P0J7 381 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 CHST2Q9Y4C5 530 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 A0A0G2JN53 185 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 J3QLW9 94 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 FFAR1O14842 300 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 CHST10O43529 356 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 KLHL18O94889 574 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PTHLHP12272 177 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF19P17023 458 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ANXA7P20073 488 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ATP5A1P25705 553 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 AOAHP28039 575 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TAP2Q03519 686 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 GSG1Q2KHT4 349 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF630Q2M218 657 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 SYTL3Q4VX76 610 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 CCNJQ5T5M9 372 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PYHIN1Q6K0P9 492 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 SLC27A4Q6P1M0 643 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 SLC36A4Q6YBV0 504 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 CXXC5Q7LFL8 322 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 FBXO15Q8NCQ5 510 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR52N2Q8NGI0 321 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR5M3Q8NGP4 307 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR10K1Q8NGX5 313 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 EXOSC8Q96B26 276 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 CMSS1Q9BQ75 279 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PDCD10Q9BUL8 212 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 POLMQ9NP87 494 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 FBXW2Q9UKT8 454 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 A0A0C4DFX4 3053 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 MEIKINA0A087WXM9 373 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TRDV1A0A1B0GX56 115 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 UBE2QL1A1L167 161 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TRABD2BA6NFA1 517 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 LRRN3E7EW58 273 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PEX14O75381 377 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ECDO95905 644 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 RLN2P04090 185 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 WNT1P04628 370 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 FAM157BP0CG42 384 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ALPPL2P10696 532 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PRG2P13727 222 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 CXCL2P19875 107 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 HOXD9P28356 352 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 RAD52P43351 418 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TPBGQ13641 420 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TCTN3Q6NUS6 607 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PGBD2Q6P3X8 592 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TRMT11Q7Z4G4 463 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 DDX53Q86TM3 631 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 VRK3Q8IV63 474 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 GPR26Q8NDV2 337 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TREX2Q9BQ50 279 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ORAI3Q9BRQ5 295 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 WRAP53Q9BUR4 548 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 NKX6-2Q9C056 277 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 LRRN3Q9H3W5 708 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 BRD9Q9H8M2 597 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TDP1Q9NUW8 608 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 IRAK3Q9Y616 596 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TRBV23-1A0A0A0MS06 115 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 DAPL1A0PJW8 107 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZC3H12DA2A288 527 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 MFSD2BA6NFX1 497 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ANHXE9PGG2 379 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PRODHO43272 600 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PRAMEF4O60810 478 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 ANKRD34CP0C6C1 535 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TFPIP10646 304 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 HK1P19367 917 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 MMP11P24347 488 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 KCNJ3P48549 501 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 TAS2R41P59536 307 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 BAMBIQ13145 260 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 CAMK1Q14012 370 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 SLC25A35Q3KQZ1 300 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 PRAMEF9Q5VWM5 478 aa9.2□□□□□ -0.94
TNFAIP3-210ENST00000620204 IKBIPQ70UQ0 350 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms