RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CLDN24A6NM45 220 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 CPSF4LA6NMK7 179 aaKnown RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 H0YIG0 161 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 H3BMQ9 156 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 AP3D1O14617 1153 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 NKX2-2O95096 273 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 RPS4Y1P22090 263 aaKnown RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 MMP11P24347 488 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 TRHRP34981 398 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 MAP2K4P45985 399 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 EEF1A1P68104 462 aaKnown RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 POU6F2P78424 691 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 BTG2P78543 158 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 HSD11B2P80365 405 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 ROR2Q01974 943 aaKnown RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 CFHR1Q03591 330 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 ST3GAL3Q11203 375 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 AMZ1Q400G9 498 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 EIPR1Q53HC9 387 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 SVOPQ8N4V2 548 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 OR51Q1Q8NH59 317 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 PMM1Q92871 262 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 COG8Q96MW5 612 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 SIGLEC11Q96RL6 698 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 ELF4Q99607 663 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 SEMA4GQ9NTN9 838 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 FBXO34Q9NWN3 711 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 SLC6A14Q9UN76 642 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 TMEM184BQ9Y519 407 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 EML5Q05BV3 1969 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 THADAQ6YHU6 1953 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 A0A087WUU8 490 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 CLCA1A8K7I4 914 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 H3BN98 237 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 DUX1O43812 170 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 SOX14O95416 240 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 DBIP07108 87 aaKnown RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 IGFBP1P08833 259 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 ARRB1P49407 418 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 HOXC5Q00444 222 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 ALDH6A1Q02252 535 aaKnown RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 ZNF155Q12901 538 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 SHBQ15464 509 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 MAPK14Q16539 360 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 ENTPD8Q5MY95 495 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 LYSMD4Q5XG99 296 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 METTL27Q8N6F8 245 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 Q8N9G6 341 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-206ENST00000619300 RORBQ92753 470 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 FKBP10Q96AY3 582 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 MCHR1Q99705 422 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 SH3GL3Q99963 347 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 COPS4Q9BT78 406 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 ANKRD19PQ9H560 264 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 CLDN16Q9Y5I7 305 aa17.72■□□□□ 0.43
PSPC1-206ENST00000619300 CENPVL1A0A0U1RR11 272 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 GXYLT2A0PJZ3 443 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 KIAA0513O60268 411 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 NOL3O60936 208 aaKnown RBP17.71■□□□□ 0.43
PSPC1-206ENST00000619300 ATE1O95260 518 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 CD1CP29017 333 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 DHPSP49366 369 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-206ENST00000619300 ARL4DP49703 201 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 SEPHS1P49903 392 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 GP2P55259 537 aaKnown RBP17.71■□□□□ 0.43
PSPC1-206ENST00000619300 HSD17B7P56937 341 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 GPLD1P80108 840 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 LSM11P83369 360 aaKnown RBP eCLIP17.71■□□□□ 0.43
PSPC1-206ENST00000619300 BNC1Q01954 994 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 SLX4IPQ5VYV7 408 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 AP1ARQ63HQ0 302 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 FIGNL1Q6PIW4 674 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 PTCHD4Q6ZW05 846 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 GGHQ92820 318 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 MYDGFQ969H8 173 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 DGAT2Q96PD7 388 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 LMF2Q9BU23 707 aaKnown RBP17.71■□□□□ 0.43
PSPC1-206ENST00000619300 AMBNQ9NP70 447 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 POLE3Q9NRF9 147 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 FKBP14Q9NWM8 211 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 WARS2Q9UGM6 360 aaKnown RBP17.71■□□□□ 0.43
PSPC1-206ENST00000619300 NDOR1Q9UHB4 597 aa17.71■□□□□ 0.43
PSPC1-206ENST00000619300 OR2W5A6NFC9 320 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 M0R129 80 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 OR2B3O76000 313 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 TP53P04637 393 aaPredicted RBP17.71■□□□□ 0.42
PSPC1-206ENST00000619300 MYF5P13349 255 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 GNSP15586 552 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 IFNGR2P38484 337 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 MASP1P48740 699 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 EMDP50402 254 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 MLLT1Q03111 559 aaPredicted RBP17.71■□□□□ 0.42
PSPC1-206ENST00000619300 MVKQ03426 396 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 NR1D2Q14995 579 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 GPA33Q99795 319 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 ACOT13Q9NPJ3 140 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 ENAMQ9NRM1 1142 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 KCNE5Q9UJ90 142 aa17.71■□□□□ 0.42
PSPC1-206ENST00000619300 SH3D21A4FU49 640 aa17.7■□□□□ 0.42
PSPC1-206ENST00000619300 TRIM64BA6NI03 449 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms