RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 A0A087X0M5 115 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 A0A1B0GX30 115 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 CDHR4A6H8M9 788 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 POM121BA6NF01 834 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 UNC119BA6NIH7 251 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 SERPINA2P20848 420 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 RPS12P25398 132 aaKnown RBP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 HCAR3P49019 387 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 DCAF12L1Q5VU92 463 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 BRICD5Q6PL45 260 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 MRPL10Q7Z7H8 261 aaKnown RBP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 CYP2W1Q8TAV3 490 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 HAVCR2Q8TDQ0 301 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 CMTM7Q96FZ5 175 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 ARNT2Q9HBZ2 717 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 MCCC2Q9HCC0 563 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 SLC27A5Q9Y2P5 690 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 ANKRD26Q9UPS8 1709 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 CLDN24A6NM45 220 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 K7ERQ8 282 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 EPHA1P21709 976 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 RAB13P51153 203 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 B3GLCTQ6Y288 498 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 OR6V1Q8N148 313 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 CELF2-AS1Q8N7Q2 184 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 HMGB4Q8WW32 186 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 ARSGQ96EG1 525 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 PDCD1LG2Q9BQ51 273 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 MROH6A6NGR9 719 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 STAG3L2P0CL84 134 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 BDH1Q02338 343 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 LYPD4Q6UWN0 246 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 KCNH6Q9H252 994 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 SETD1AO15047 1707 aaKnown RBP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 CST2P09228 141 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 GABRB3P28472 473 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 LCN6P62502 163 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 SLC35B4Q969S0 331 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 PARD6AQ9NPB6 346 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 NOX1Q9Y5S8 564 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 M0R143 59 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 BMP4P12644 408 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 HSD17B1P14061 328 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 NME2P22392 152 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 HBG1P69891 147 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 HBG2P69892 147 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 GLO1Q04760 184 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 APOFQ13790 326 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 FJX1Q86VR8 437 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 NIPA2Q8N8Q9 360 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 FEVQ99581 238 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 SLC25A32Q9H2D1 315 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 SLCO5A1Q9H2Y9 848 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 UMAD1C9J7I0 102 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 KIAA0355O15063 1070 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 INSIG1O15503 277 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 GDF10P55107 478 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 TOR2AQ5JU69 321 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 TEX261Q6UWH6 196 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 OR4D10Q8NGI6 311 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 LMX1AQ8TE12 382 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 ARHGDIGQ99819 225 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 POLDIP3Q9BY77 421 aaKnown RBP14.29□□□□□ -0.12
COL5A1-208ENST00000618395 C1orf123Q9NWV4 160 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 U3KQ87 197 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 MMP7P09237 267 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-208ENST00000618395 CNTN2Q02246 1040 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 PAQR3Q6TCH7 311 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 CCDC116Q8IYX3 515 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 RCBTB1Q8NDN9 531 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 OR51Q1Q8NH59 317 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 SMIM12Q96EX1 92 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 CERS4Q9HA82 394 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 TMEM82A0PJX8 343 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 TMEM221A6NGB7 291 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 UQCRC2P22695 453 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 MAP2K5Q13163 448 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 CLINT1Q14677 625 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 ENPP6Q6UWR7 440 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 SLC41A2Q96JW4 573 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 SLC2A8Q9NY64 477 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 ERVW-1Q9UQF0 538 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 LATO43561 262 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 FZD7O75084 574 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 GLUD1P00367 558 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 SERPINE2P07093 398 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 SRA1Q9HD15 236 aaKnown RBP14.29□□□□□ -0.12
COL5A1-208ENST00000618395 NPFFR2Q9Y5X5 522 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 DVL2O14641 736 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 CLDN11O75508 207 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 ITGB2P05107 769 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 FHP07954 510 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 THBS2P35442 1172 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 PCP4P48539 62 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 PSMB3P49720 205 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 PLEKHH3Q7Z736 793 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 ZCCHC10Q8TBK6 192 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 C7orf43Q8WVR3 580 aa14.29□□□□□ -0.12
COL5A1-208ENST00000618395 TMEM150BA6NC51 233 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms