RNA–Protein interactions for RNA: ENST00000618385.1

SYNJ2BP-COX16-204, Transcript of SYNJ2BP-COX16 readthrough, humanhuman

TSL 3

Gene SYNJ2BP-COX16, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16-204ENST00000618385 CHMP24386 653 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 RFX3P48380 749 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 GFRA1P56159 465 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 DSCR4P56555 118 aaPredicted RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 RPL38P63173 70 aaKnown RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 HSPB3Q12988 150 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 KIAA0040Q15053 153 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 PRSS53Q2L4Q9 553 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 GALNTL6Q49A17 601 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 VPS26BQ4G0F5 336 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 TRABD2AQ86V40 505 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 BANPQ8N9N5 519 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 OR2W6PQ8NHA6 318 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 CEP70Q8NHQ1 597 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 GFM2Q969S9 779 aaKnown RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 ZBED6CLQ96FA7 236 aaPredicted RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 ZNF764Q96H86 408 aaPredicted RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 EGLN2Q96KS0 407 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 FAM111AQ96PZ2 611 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 SH3GL2Q99962 352 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 TUBA1CQ9BQE3 449 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 POLDIP3Q9BY77 421 aaKnown RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 REEP4Q9H6H4 257 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 ANKZF1Q9H8Y5 726 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 DNAJB12Q9NXW2 375 aaKnown RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 SH3BP4Q9P0V3 963 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 RPH3AQ9Y2J0 694 aaPredicted RBP12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 PTGDR2Q9Y5Y4 395 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 SPG11Q96JI7 2443 aa12.4□□□□□ -0.42
SYNJ2BP-COX16-204ENST00000618385 CLCA1A8K7I4 914 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TMEM114B3SHH9 223 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 AKAP10O43572 662 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 NPHS1O60500 1241 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 CTAG2O75638 210 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 PSMG1O95456 288 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 PRPS2P11908 318 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TCEA1P23193 301 aaKnown RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TACR1P25103 407 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 MAPK1P28482 360 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 ASMTP46597 345 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 STARP49675 285 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 AGFG1P52594 562 aaKnown RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 GAS1P54826 345 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 MANFP55145 182 aaKnown RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 EEF1A1P68104 462 aaKnown RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 GAB1Q13480 694 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 SNTB1Q13884 538 aaKnown RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 GANABQ14697 944 aaKnown RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 FLYWCH1Q4VC44 716 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 EEF1A1P5Q5VTE0 462 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 KANK2Q63ZY3 851 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 Q6ZSR9 355 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 ZNF551Q7Z340 670 aaPredicted RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 SZRD1Q7Z422 152 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 R3HCC1LQ7Z5L2 792 aaKnown RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 GRAMD2AQ8IUY3 354 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 FAM222BQ8WU58 562 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 RNF138Q8WVD3 245 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 WNT2BQ93097 391 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TSSK3Q96PN8 268 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 LMF2Q9BU23 707 aaKnown RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 SFXN3Q9BWM7 321 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TBL1XR1Q9BZK7 514 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 DSN1Q9H410 356 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 HHATLQ9HCP6 504 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 EQTNQ9NQ60 294 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 CRIM1Q9NZV1 1036 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TRAF6Q9Y4K3 522 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 DNAJC15Q9Y5T4 150 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 MED13LQ71F56 2210 aa12.39□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 F8P00451 2351 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TEP1Q99973 2627 aaKnown RBP12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TUBAL3A6NHL2 446 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 LINC01387J3KSC0 135 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 LSM1O15116 133 aaKnown RBP12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 FADS1O60427 444 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 ZIC3O60481 467 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 TBX19O60806 448 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 SPAG7O75391 227 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 RCBTB2O95199 551 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 IL33O95760 270 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 FGF4P08620 206 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 PEPDP12955 493 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 ZNF708P17019 499 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 SDC1P18827 310 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 HK1P19367 917 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 POU3F2P20265 443 aaPredicted RBP12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 ALDH3A1P30838 453 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 GABRA3P34903 492 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 RPL3P39023 403 aaKnown RBP12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 LHX2P50458 406 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 PRKAG1P54619 331 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 EEFSECP57772 596 aaKnown RBP12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 STX5Q13190 355 aa12.38□□□□□ -0.43
SYNJ2BP-COX16-204ENST00000618385 BCL2A1Q16548 175 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms