RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 SOD1P00441 154 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 HPXP02790 462 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 ITGB7P26010 798 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 DSC1Q08554 894 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 C3orf38Q5JPI3 329 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 SLC22A10Q63ZE4 541 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 THAP6Q8TBB0 222 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 UPF1Q92900 1129 aaKnown RBP eCLIP14.74□□□□□ -0.05
SYNRG-223ENST00000616179 CRB3Q9BUF7 120 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 SLC12A9Q9BXP2 914 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 C20orf85Q9H1P6 137 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 PTTG3PQ9NZH4 202 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 STON1Q9Y6Q2 735 aa14.74□□□□□ -0.05
SYNRG-223ENST00000616179 SOCS6O14544 535 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 PRICKLE3O43900 615 aaPredicted RBP14.73□□□□□ -0.05
SYNRG-223ENST00000616179 RASGRP1O95267 797 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 HSD3B1P14060 373 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 GSTM3P21266 225 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 CLCNKAP51800 687 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 LIX1LQ8IVB5 337 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 C16orf78Q8WTQ4 265 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 KLK6Q92876 244 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 ZFP64Q9NPA5 681 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 ASF1BQ9NVP2 202 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 EMC3Q9P0I2 261 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 CKAP5Q14008 2032 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 F8W036 122 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 RNASET2O00584 256 aaKnown RBP14.73□□□□□ -0.05
SYNRG-223ENST00000616179 SMAD6O43541 496 aaKnown RBP14.73□□□□□ -0.05
SYNRG-223ENST00000616179 SSX5O60225 188 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 GPR37L1O60883 481 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 DDNO94850 711 aaPredicted RBP14.73□□□□□ -0.05
SYNRG-223ENST00000616179 ATP1B2P14415 290 aaPredicted RBP14.73□□□□□ -0.05
SYNRG-223ENST00000616179 S100A11P31949 105 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 OMPP47874 163 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 PSMD4P55036 377 aaKnown RBP14.73□□□□□ -0.05
SYNRG-223ENST00000616179 BLOC1S1P78537 153 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 METTL11BQ5VVY1 283 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 TCTN3Q6NUS6 607 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 RPTNQ6XPR3 784 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 AUNIPQ9H7T9 357 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 TDP1Q9NUW8 608 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 ASIC5Q9NY37 505 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 DVL2O14641 736 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 CENPAP49450 140 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 SORDQ00796 357 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 DOC2BQ14184 412 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 TCEA2Q15560 299 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 ZNF311Q5JNZ3 666 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 GPR142Q7Z601 462 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 TECPR1Q7Z6L1 1165 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 OR4C15Q8NGM1 316 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 BHLHE41Q9C0J9 482 aaPredicted RBP14.73□□□□□ -0.05
SYNRG-223ENST00000616179 P2RX2Q9UBL9 471 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 PLAGL1Q9UM63 463 aa14.73□□□□□ -0.05
SYNRG-223ENST00000616179 FAM86C2PA6NEL3 165 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 KCNJ13O60928 360 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 CNMDO75829 334 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 LDOC1O95751 146 aaPredicted RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 GYPBP06028 91 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 RAD52P43351 418 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 PUM1Q14671 1186 aaKnown RBP eCLIP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 CCSMST1Q4G0I0 132 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 PRAMEF13Q5VWM6 474 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 HBMQ6B0K9 141 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 ZER1Q7Z7L7 766 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 ZNF687Q8N1G0 1237 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 STPG2Q8N412 459 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 FAM98AQ8NCA5 519 aaKnown RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 OR5W2Q8NH69 310 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 SORCS1Q8WY21 1168 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 TCEAL4Q96EI5 215 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 ZBED3Q96IU2 234 aaPredicted RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 SLC38A3Q99624 504 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 C7orf50Q9BRJ6 194 aaKnown RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 POLDIP3Q9BY77 421 aaKnown RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 NIT2Q9NQR4 276 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 SIPA1L1O43166 1804 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 PSMD9O00233 223 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 MT-ND5P03915 603 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 UQCRC2P22695 453 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 ADH7P40394 386 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 SOX2P48431 317 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 SGSHP51688 502 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 ARFIP1P53367 373 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 PRMT2P55345 433 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 FLI1Q01543 452 aaPredicted RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 KCNC3Q14003 757 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 ACSM3Q53FZ2 586 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 FRRS1Q6ZNA5 592 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 BCL7CQ8WUZ0 217 aaPredicted RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 NEIL2Q969S2 332 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 SUSD3Q96L08 255 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 TREX2Q9BQ50 279 aaPredicted RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 SLC25A18Q9H1K4 315 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 ISG20L2Q9H9L3 353 aaKnown RBP14.72□□□□□ -0.05
SYNRG-223ENST00000616179 POMT2Q9UKY4 750 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 KNL1Q8NG31 2342 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 SGK494L7N484 410 aa14.72□□□□□ -0.05
SYNRG-223ENST00000616179 ATG13O75143 517 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms