RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 TMBIM1Q969X1 311 aa14.35□□□□□ -0.11
CCL3-206ENST00000614051 EFHD2Q96C19 240 aaPredicted RBP14.35□□□□□ -0.11
CCL3-206ENST00000614051 TRNT1Q96Q11 434 aaKnown RBP14.35□□□□□ -0.11
CCL3-206ENST00000614051 CDCP1Q9H5V8 836 aa14.35□□□□□ -0.11
CCL3-206ENST00000614051 MYOTQ9UBF9 498 aa14.35□□□□□ -0.11
CCL3-206ENST00000614051 MKLN1Q9UL63 735 aa14.35□□□□□ -0.11
CCL3-206ENST00000614051 SNX13Q9Y5W8 968 aa14.35□□□□□ -0.11
CCL3-206ENST00000614051 TMEM247A6NEH6 219 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 CFAP73A6NFT4 308 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 TTC36A6NLP5 189 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 OR2J2O76002 312 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 PGM3O95394 542 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 NADKO95544 446 aaPredicted RBP14.34□□□□□ -0.11
CCL3-206ENST00000614051 BNIP2Q12982 314 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 CYP27C1Q4G0S4 372 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 C1orf146Q5VVC0 180 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 B3GNTL1Q67FW5 361 aaPredicted RBP14.34□□□□□ -0.11
CCL3-206ENST00000614051 SPPL2CQ8IUH8 684 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 FAM13CQ8NE31 585 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 HIPK4Q8NE63 616 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 TNIP2Q8NFZ5 429 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 OR5L2Q8NGL0 311 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 FAM110BQ8TC76 370 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 THAP4Q8WY91 577 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 PSMF1Q92530 271 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 TP53INP1Q96A56 240 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 ZG16BQ96DA0 208 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 ASB9Q96DX5 294 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 FER1L6-AS2Q96M78 137 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 TREX2Q9BQ50 279 aaPredicted RBP14.34□□□□□ -0.11
CCL3-206ENST00000614051 QRSL1Q9H0R6 528 aaKnown RBP14.34□□□□□ -0.11
CCL3-206ENST00000614051 SLC38A1Q9H2H9 487 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 ATP13A2Q9NQ11 1180 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 LIPT1Q9Y234 373 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 ANGPT4Q9Y264 503 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 RAXQ9Y2V3 346 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 PCDHGB3Q9Y5G1 929 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 ACACAQ13085 2346 aa14.34□□□□□ -0.11
CCL3-206ENST00000614051 TO15178 435 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 CIB2O75838 187 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 ABCD3P28288 659 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 RNF144AP50876 292 aaPredicted RBP14.33□□□□□ -0.12
CCL3-206ENST00000614051 CRYBA2P53672 197 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 CRISP3P54108 245 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 AIMP2Q13155 320 aaKnown RBP14.33□□□□□ -0.12
CCL3-206ENST00000614051 RAPSNQ13702 412 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 VEZF1Q14119 521 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 GPR68Q15743 365 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 DEFB109BQ30KR1 87 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 TYW3Q6IPR3 259 aaKnown RBP14.33□□□□□ -0.12
CCL3-206ENST00000614051 FRRS1Q6ZNA5 592 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 DHFR2Q86XF0 187 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 C17orf47Q8NEP4 570 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 OMA1Q96E52 524 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 HSPBAP1Q96EW2 488 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 FLRT3Q9NZU0 649 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 ACTR3BQ9P1U1 418 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 MAGEL2Q9UJ55 1249 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 LHX6Q9UPM6 363 aa14.33□□□□□ -0.12
CCL3-206ENST00000614051 URB1O60287 2271 aaKnown RBP14.33□□□□□ -0.12
CCL3-206ENST00000614051 CPAMD8Q8IZJ3 1885 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 CENPVL1A0A0U1RR11 272 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 A6NL46 340 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 TAF4O00268 1085 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 ACOX3O15254 700 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 STX11O75558 287 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 REM1O75628 298 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 OPN1SWP03999 348 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 ITGA3P26006 1051 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 ITPKBP27987 946 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 KDELR2P33947 212 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 POLE2P56282 527 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 PCBP3P57721 371 aaKnown RBP14.32□□□□□ -0.12
CCL3-206ENST00000614051 HPCAP84074 193 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 PLCXD2Q0VAA5 305 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 TRAP1Q12931 704 aaKnown RBP14.32□□□□□ -0.12
CCL3-206ENST00000614051 FLOT2Q14254 428 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 KPNB1Q14974 876 aaKnown RBP14.32□□□□□ -0.12
CCL3-206ENST00000614051 DECR1Q16698 335 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 LRRC23Q53EV4 343 aaPredicted RBP14.32□□□□□ -0.12
CCL3-206ENST00000614051 H3F3CQ6NXT2 135 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 LRRC74BQ6ZQY2 392 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 RPS19BP1Q86WX3 136 aaKnown RBP14.32□□□□□ -0.12
CCL3-206ENST00000614051 SLC34A3Q8N130 599 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 CLEC1AQ8NC01 280 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 BHLHE22Q8NFJ8 381 aaPredicted RBP14.32□□□□□ -0.12
CCL3-206ENST00000614051 OR10Q1Q8NGQ4 319 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 FAM162AQ96A26 154 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 HS3ST6Q96QI5 342 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 RASL10BQ96S79 203 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 RSPO3Q9BXY4 272 aaPredicted RBP14.32□□□□□ -0.12
CCL3-206ENST00000614051 ZNF350Q9GZX5 532 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 BCL2L10Q9HD36 194 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 POLHQ9Y253 713 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 WDR45Q9Y484 360 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 NPFFR2Q9Y5X5 522 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 PKD1L2Q7Z442 2459 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 LOC400499M0QZD8 3231 aa14.32□□□□□ -0.12
CCL3-206ENST00000614051 A0A0G2JPF8 293 aa14.31□□□□□ -0.12
CCL3-206ENST00000614051 HNRNPCL2B2RXH8 293 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms