RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 SLC10A1Q14973 349 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 TIGD3Q6B0B8 471 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 NIPBLQ6KC79 2804 aaeCLIP14.79□□□□□ -0.04
LSM4-206ENST00000600289 MFSD12Q6NUT3 480 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 EID3Q8N140 333 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 OR4N2Q8NGD1 307 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 SFXN5Q8TD22 340 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 ACTRT2Q8TDY3 377 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 PHF10Q8WUB8 498 aaKnown RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 FAM120BQ96EK7 910 aaKnown RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 ADOQ96SZ5 270 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 DPY30Q9C005 99 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 DEFB127Q9H1M4 99 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 SUCOQ9UBS9 1254 aaKnown RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 MARCOQ9UEW3 520 aaPredicted RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 MRTO4Q9UKD2 239 aaKnown RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 ABCG2Q9UNQ0 655 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 RNASET2O00584 256 aaKnown RBP14.78□□□□□ -0.04
LSM4-206ENST00000600289 CCL21O00585 134 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 BCKDKO14874 412 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 ICOSLGO75144 302 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 SOX30O94993 753 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 PTPN6P29350 595 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 PRIM2P49643 509 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 DECR1Q16698 335 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 DESI1Q6ICB0 168 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 FJX1Q86VR8 437 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 DOLPP1Q86YN1 238 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 OR56A1Q8NGH5 318 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 LRRC8CQ8TDW0 803 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 ACBD3Q9H3P7 528 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 CXorf36Q9H7Y0 433 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 ZCCHC3Q9NUD5 404 aaKnown RBP14.78□□□□□ -0.04
LSM4-206ENST00000600289 KLRF1Q9NZS2 232 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 TINAGQ9UJW2 476 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 PCDHGB3Q9Y5G1 929 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 WIF1Q9Y5W5 379 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 LIPGQ9Y5X9 500 aa14.78□□□□□ -0.04
LSM4-206ENST00000600289 NUP214P35658 2090 aaPredicted RBP14.78□□□□□ -0.04
LSM4-206ENST00000600289 TRGV5A0A0B4J1U4 118 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 E9PLN8 166 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 ADAM10O14672 748 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 SCN2BO60939 215 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 KCNH1O95259 989 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 C6orf47O95873 294 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 CELA3AP09093 270 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 KITP10721 976 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 ACP2P11117 423 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 CYP4B1P13584 511 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 GDF1P27539 372 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 EPHA3P29320 983 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 LCN1P31025 176 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 KIR3DL1P43629 444 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 MASP1P48740 699 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 GAS1P54826 345 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 WNT3P56703 355 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 ANGPTL8Q6UXH0 198 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 RPTNQ6XPR3 784 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 MAVSQ7Z434 540 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 FAM110BQ8TC76 370 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 NUDT8Q8WV74 236 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 EFHD2Q96C19 240 aaPredicted RBP14.77□□□□□ -0.05
LSM4-206ENST00000600289 DTNBP1Q96EV8 351 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 CCDC120Q96HB5 630 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 JSRP1Q96MG2 331 aaPredicted RBP14.77□□□□□ -0.05
LSM4-206ENST00000600289 STACQ99469 402 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 VKORC1Q9BQB6 163 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 TP63Q9H3D4 680 aaPredicted RBP14.77□□□□□ -0.05
LSM4-206ENST00000600289 WDR55Q9H6Y2 383 aaPredicted RBP14.77□□□□□ -0.05
LSM4-206ENST00000600289 DUSP22Q9NRW4 184 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 FAM120CQ9NX05 1096 aaKnown RBP14.77□□□□□ -0.05
LSM4-206ENST00000600289 MEMO1Q9Y316 297 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 GPR45Q9Y5Y3 372 aa14.77□□□□□ -0.05
LSM4-206ENST00000600289 SPG11Q96JI7 2443 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 FADS1O60427 444 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 PDE9AO76083 593 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 HMGN2P05204 90 aaKnown RBP14.76□□□□□ -0.05
LSM4-206ENST00000600289 KRT16P08779 473 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 EFNA1P20827 205 aaPredicted RBP14.76□□□□□ -0.05
LSM4-206ENST00000600289 ENDOUP21128 410 aaKnown RBP14.76□□□□□ -0.05
LSM4-206ENST00000600289 GABRA3P34903 492 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 EVI2BP34910 448 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 CCT3P49368 545 aaKnown RBP14.76□□□□□ -0.05
LSM4-206ENST00000600289 MAN2A2P49641 1150 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 PRKAG1P54619 331 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 HBA1P69905 142 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.76□□□□□ -0.05
LSM4-206ENST00000600289 NHSL2Q5HYW2 709 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 EMC4Q5J8M3 183 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 ANXA8L1Q5VT79 327 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 OR4F3Q6IEY1 312 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 CDC73Q6P1J9 531 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 WDR53Q7Z5U6 358 aaPredicted RBP14.76□□□□□ -0.05
LSM4-206ENST00000600289 CD163Q86VB7 1156 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 WDSUB1Q8N9V3 476 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 OR1J4Q8NGS1 313 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 NEIL3Q8TAT5 605 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 SARAFQ96BY9 339 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 DMRTA2Q96SC8 542 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 GALNT9Q9HCQ5 603 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms