RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 BAG5Q9UL15 447 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 AURKCQ9UQB9 309 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 GPC6Q9Y625 555 aaPredicted RBP14.31□□□□□ -0.12
UPF1-206ENST00000598471 KRT36O76013 467 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 PRKD3O94806 890 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 F8A1P23610 371 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 NRG3P56975 720 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 CHRNEQ04844 493 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 TBC1D25Q3MII6 688 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 TBCELQ5QJ74 424 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 CCNJQ5T5M9 372 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 IRAK1BP1Q5VVH5 260 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 FIGNL1Q6PIW4 674 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 FRRS1Q6ZNA5 592 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 MRGPREQ86SM8 312 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 GALNT10Q86SR1 603 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 PEX5LQ8IYB4 626 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 ADGRG5Q8IZF4 528 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 TAGAPQ8N103 731 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 PYDC1Q8WXC3 89 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 ADIPOR1Q96A54 375 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 TAMM41Q96BW9 452 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 SLC47A1Q96FL8 570 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 PYURFQ96I23 114 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 IMMP1LQ96LU5 166 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 SEPHS2Q99611 448 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 NXF5Q9H1B4 397 aaKnown RBP14.3□□□□□ -0.12
UPF1-206ENST00000598471 MAGIXQ9H6Y5 334 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 RUBCNLQ9H714 662 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 MMP25Q9NPA2 562 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 CCM2LQ9NUG4 571 aaPredicted RBP14.3□□□□□ -0.12
UPF1-206ENST00000598471 WDR70Q9NW82 654 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 ZNF232Q9UNY5 417 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 IFT52Q9Y366 437 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 MSRB2Q9Y3D2 182 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 AP4S1Q9Y587 144 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 V9GYQ6 96 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 DSPPQ9NZW4 1301 aa14.3□□□□□ -0.12
UPF1-206ENST00000598471 TO15178 435 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 KIAA0513O60268 411 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 GCM2O75603 506 aaPredicted RBP14.29□□□□□ -0.12
UPF1-206ENST00000598471 ATP6V1G2O95670 118 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 OPN1SWP03999 348 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 RAP2AP10114 183 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 LCN1P31025 176 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 RFX3P48380 749 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 NR0B1P51843 470 aaKnown RBP14.29□□□□□ -0.12
UPF1-206ENST00000598471 SELENOWP63302 87 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 PLCXD2Q0VAA5 305 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 IL10RAQ13651 578 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 LARS2Q15031 903 aaKnown RBP14.29□□□□□ -0.12
UPF1-206ENST00000598471 RCN1Q15293 331 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.29□□□□□ -0.12
UPF1-206ENST00000598471 FLYWCH1Q4VC44 716 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 TYW3Q6IPR3 259 aaKnown RBP14.29□□□□□ -0.12
UPF1-206ENST00000598471 FKBP9P1Q75LS8 142 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 SLC34A3Q8N130 599 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 BCORP1Q8N888 145 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 ZNF441Q8N8Z8 693 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 ELP5Q8TE02 316 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 CANT1Q8WVQ1 401 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 PROX1Q92786 737 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 TPD52L3Q96J77 140 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 HSH2DQ96JZ2 352 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 DOHHQ9BU89 302 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 SAP130Q9H0E3 1048 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 ZNF160Q9HCG1 818 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 RYDENQ9NUL5 291 aaKnown RBP14.29□□□□□ -0.12
UPF1-206ENST00000598471 P4HTMQ9NXG6 502 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 ZNF223Q9UK11 482 aaPredicted RBP14.29□□□□□ -0.12
UPF1-206ENST00000598471 FBXL4Q9UKA2 621 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 SLC13A4Q9UKG4 626 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 MKLN1Q9UL63 735 aa14.29□□□□□ -0.12
UPF1-206ENST00000598471 H0Y3Z8 333 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 HS6ST1O60243 411 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 FCMRO60667 390 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 MFN2O95140 757 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 DBIP07108 87 aaKnown RBP14.28□□□□□ -0.12
UPF1-206ENST00000598471 FCGR1AP12314 374 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 LIFP15018 202 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 IL12BP29460 328 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 GPR68Q15743 365 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 IFI44LQ53G44 452 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 ENPP6Q6UWR7 440 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 OR4N2Q8NGD1 307 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 FAM110BQ8TC76 370 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 SLC22A8Q8TCC7 542 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 OIT3Q8WWZ8 545 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 HOXD1Q9GZZ0 328 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 RASSF4Q9H2L5 321 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 ARMC7Q9H6L4 198 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 RNPEPL1Q9HAU8 725 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 ARMC1Q9NVT9 282 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 IL17BQ9UHF5 180 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 PCDHGA10Q9Y5H3 936 aa14.28□□□□□ -0.12
UPF1-206ENST00000598471 MRPS18BQ9Y676 258 aaKnown RBP14.28□□□□□ -0.12
UPF1-206ENST00000598471 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.13
UPF1-206ENST00000598471 REM1O75628 298 aa14.27□□□□□ -0.13
UPF1-206ENST00000598471 IL33O95760 270 aa14.27□□□□□ -0.13
UPF1-206ENST00000598471 BAG2O95816 211 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms