RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CROCCP2Q86T23 111 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 EXOC3L1Q86VI1 746 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 LURAP1LQ8IV03 231 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 DMRTC2Q8IXT2 367 aaPredicted RBP9.57□□□□□ -0.88
CCDC9-203ENST00000596938 NATD1Q8N6N6 113 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 ZFP28Q8NHY6 868 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 CIDECQ96AQ7 238 aaPredicted RBP9.57□□□□□ -0.88
CCDC9-203ENST00000596938 EFHD2Q96C19 240 aaPredicted RBP9.57□□□□□ -0.88
CCDC9-203ENST00000596938 C3orf14Q9HBI5 128 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 SDHAF3Q9NRP4 125 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 TAS2R10Q9NYW0 307 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 ZNF629Q9UEG4 869 aaPredicted RBP9.57□□□□□ -0.88
CCDC9-203ENST00000596938 FBXL2Q9UKC9 423 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 ABCG2Q9UNQ0 655 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 PCNX1Q96RV3 2341 aa9.57□□□□□ -0.88
CCDC9-203ENST00000596938 ZNF407Q9C0G0 2248 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 CSMD2Q7Z408 3487 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 ABCA12Q86UK0 2595 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 ENO4A6NNW6 628 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 SYT5O00445 386 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 TM9SF1O15321 606 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 LYPLA1O75608 230 aaPredicted RBP9.56□□□□□ -0.88
CCDC9-203ENST00000596938 NKX2-2O95096 273 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 SNUPNO95149 360 aaKnown RBP9.56□□□□□ -0.88
CCDC9-203ENST00000596938 IL2RAP01589 272 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 CAPN3P20807 821 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 CHMP24386 653 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 GABRA3P34903 492 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 GPC1P35052 558 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 SERPINB4P48594 390 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 CLK3P49761 638 aaKnown RBP9.56□□□□□ -0.88
CCDC9-203ENST00000596938 DSCR4P56555 118 aaPredicted RBP9.56□□□□□ -0.88
CCDC9-203ENST00000596938 HSPB3Q12988 150 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 BCL2A1Q16548 175 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 SMU1Q2TAY7 513 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 OR5M10Q6IEU7 315 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 AAGABQ6PD74 315 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 ZCCHC12Q6PEW1 402 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 TRIM42Q8IWZ5 723 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 FADS6Q8N9I5 356 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 CDRT4Q8N9R6 151 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 TNIP2Q8NFZ5 429 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 OR14L1PQ8NHC6 308 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 CLHC1Q8NHS4 586 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 FAM110BQ8TC76 370 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 COQ8BQ96D53 544 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 PGM2Q96G03 612 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 C3orf30Q96M34 536 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 ZIM3Q96PE6 472 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 FAM120CQ9NX05 1096 aaKnown RBP9.56□□□□□ -0.88
CCDC9-203ENST00000596938 CAMK2AQ9UQM7 478 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.56□□□□□ -0.88
CCDC9-203ENST00000596938 ACTL7BQ9Y614 415 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 MYO9AB2RTY4 2548 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 CACNA1DQ01668 2161 aa9.56□□□□□ -0.88
CCDC9-203ENST00000596938 PDZD2O15018 2839 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 OTOGQ6ZRI0 2925 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 A0A1W2PRB8 838 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 MBD3L4A6NDZ8 208 aaPredicted RBP9.55□□□□□ -0.88
CCDC9-203ENST00000596938 MBD3L3A6NE82 208 aaPredicted RBP9.55□□□□□ -0.88
CCDC9-203ENST00000596938 MBD3L5A6NJ08 208 aaPredicted RBP9.55□□□□□ -0.88
CCDC9-203ENST00000596938 DVL2O14641 736 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 SCAMP2O15127 329 aaKnown RBP9.55□□□□□ -0.88
CCDC9-203ENST00000596938 EMC8O43402 210 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 SOX30O94993 753 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 KCNH1O95259 989 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 SERPINE1P05121 402 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 NGFRP08138 427 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 DHRS4L1P0CG22 281 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 PRPS1L1P21108 318 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 DPP4P27487 766 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 LCN1P31025 176 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 EVI2BP34910 448 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 HPCAL1P37235 193 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 PRKAG1P54619 331 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 EMX2Q04743 252 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 C17orf67Q0P5P2 114 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 RCAN2Q14206 197 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 EXOSC6Q5RKV6 272 aaKnown RBP9.55□□□□□ -0.88
CCDC9-203ENST00000596938 DCST1Q5T197 706 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 IL23RQ5VWK5 629 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 CES4AQ5XG92 561 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 POMZP3Q6PJE2 187 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 WDR53Q7Z5U6 358 aaPredicted RBP9.55□□□□□ -0.88
CCDC9-203ENST00000596938 ADGRE4PQ86SQ3 457 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 IFNEQ86WN2 208 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 RIMKLAQ8IXN7 391 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 FNDC5Q8NAU1 212 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 NAXEQ8NCW5 288 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 NUP43Q8NFH3 380 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 OR2M3Q8NG83 312 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 MBD3L2Q8NHZ7 208 aaPredicted RBP9.55□□□□□ -0.88
CCDC9-203ENST00000596938 PSMA8Q8TAA3 256 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 PPP1R14CQ8TAE6 165 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 AGR3Q8TD06 166 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 GPR151Q8TDV0 419 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 DUSP19Q8WTR2 217 aa9.55□□□□□ -0.88
CCDC9-203ENST00000596938 OR5P2Q8WZ92 322 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms