RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 OR5AK3PQ8NH89 298 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 CEP70Q8NHQ1 597 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 FAM57AQ8TBR7 257 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 FAM110BQ8TC76 370 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 GPR151Q8TDV0 419 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 TESCQ96BS2 214 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 ZNF597Q96LX8 424 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 PRPF18Q99633 342 aaKnown RBP10.18□□□□□ -0.78
VRK3-210ENST00000596121 OSBPL11Q9BXB4 747 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 METTL7AQ9H8H3 244 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 C3orf14Q9HBI5 128 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 SERHLQ9NQF3 203 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 ZCCHC3Q9NUD5 404 aaKnown RBP10.18□□□□□ -0.78
VRK3-210ENST00000596121 ATAD3AQ9NVI7 634 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 BOKQ9UMX3 212 aaPredicted RBP10.18□□□□□ -0.78
VRK3-210ENST00000596121 SNX8Q9Y5X2 465 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 A0A1B0GUH1 482 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 NPIPA2E9PIF3 369 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 NPIPA3F8WFD2 350 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 ACOT7O00154 380 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 CCL21O00585 134 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 SNPHO15079 494 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 DIAPH2O60879 1101 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 KCNK2O95069 426 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 CPSF4O95639 269 aaKnown RBP10.17□□□□□ -0.78
VRK3-210ENST00000596121 CLDN1O95832 211 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 HPNP05981 417 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 ABOP16442 354 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 KIR3DL1P43629 444 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 RPS26P62854 115 aaKnown RBP10.17□□□□□ -0.78
VRK3-210ENST00000596121 RPP38P78345 283 aaKnown RBP10.17□□□□□ -0.78
VRK3-210ENST00000596121 ADORA2A-AS1P86434 159 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 RBPJQ06330 500 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 SNTA1Q13424 505 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 EFR3AQ14156 821 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 LASP1Q14847 261 aaKnown RBP10.17□□□□□ -0.78
VRK3-210ENST00000596121 CDSNQ15517 529 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 GRAMD1BQ3KR37 738 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 FAM174BQ3ZCQ3 159 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 EIPR1Q53HC9 387 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 CCNJQ5T5M9 372 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 HIST2H2BCQ6DN03 193 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 OR5M10Q6IEU7 315 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 ARHGAP11AQ6P4F7 1023 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 FIGNL1Q6PIW4 674 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 SZRD1Q7Z422 152 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 CD163Q86VB7 1156 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 MARVELD2Q8N4S9 558 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 NATD1Q8N6N6 113 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 CDRT4Q8N9R6 151 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 OR5M9Q8NGP3 310 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 OR4C3Q8NH37 302 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 SLC9A6Q92581 669 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 CDS1Q92903 461 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 TMCO6Q96DC7 493 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 RMND5BQ96G75 393 aaPredicted RBP10.17□□□□□ -0.78
VRK3-210ENST00000596121 CCDC120Q96HB5 630 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 DMRTA2Q96SC8 542 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 INPP5KQ9BT40 448 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 Q9N2J8 555 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 ACKR4Q9NPB9 350 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 PNPLA3Q9NST1 481 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 KLRF1Q9NZS2 232 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 FBXL2Q9UKC9 423 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 MAPRE3Q9UPY8 281 aa10.17□□□□□ -0.78
VRK3-210ENST00000596121 PCNX3Q9H6A9 2034 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 TRGV5A0A0B4J1U4 118 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 PRSS51A0A1B0GVH4 220 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 A1L4Q6 167 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 E9PBE3 544 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 RNASET2O00584 256 aaKnown RBP10.16□□□□□ -0.78
VRK3-210ENST00000596121 AQP7O14520 342 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 CFLARO15519 480 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 SUSD5O60279 629 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 ABCB7O75027 752 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 UTS2O95399 124 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 TPOP07202 933 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 ALOX5P09917 674 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 DDX5P17844 614 aaKnown RBP10.16□□□□□ -0.78
VRK3-210ENST00000596121 GDF1P27539 372 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 IL12BP29460 328 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 EVI2BP34910 448 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 CDKN2CP42773 168 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 RFX3P48380 749 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 MASP1P48740 699 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 AQP5P55064 265 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 CASP9P55211 416 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 PSPHP78330 225 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 PRR5P85299 388 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 TP53BP2Q13625 1128 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 ZNHIT3Q15649 155 aaPredicted RBP10.16□□□□□ -0.78
VRK3-210ENST00000596121 DECR1Q16698 335 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.16□□□□□ -0.78
VRK3-210ENST00000596121 GXYLT1Q4G148 440 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 PDCD4Q53EL6 469 aaKnown RBP10.16□□□□□ -0.78
VRK3-210ENST00000596121 WIPI1Q5MNZ9 446 aaPredicted RBP10.16□□□□□ -0.78
VRK3-210ENST00000596121 RTL6Q6ICC9 239 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 CDC73Q6P1J9 531 aa10.16□□□□□ -0.78
VRK3-210ENST00000596121 PAOXQ6QHF9 649 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms