RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 NACC2Q96BF6 587 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 RMND5BQ96G75 393 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 LCORQ96JN0 433 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 COL21A1Q96P44 957 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 SEPHS2Q99611 448 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 DOHHQ9BU89 302 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 WWTR1Q9GZV5 400 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 NXF5Q9H1B4 397 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 MTHFD2LQ9H903 347 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 AURKCQ9UQB9 309 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 WDR45Q9Y484 360 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 V9GYQ6 96 aa13.64□□□□□ -0.23
SHKBP1-211ENST00000595945 CNTRLQ7Z7A1 2325 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 HNRNPRO43390 633 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 SERPINB7O75635 380 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 KCNJ5P48544 419 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 RNF4P78317 190 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 PSPHP78330 225 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 HPCAP84074 193 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 IQCCQ4KMZ1 466 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 FIGNL1Q6PIW4 674 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 DHRS4L2Q6PKH6 230 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 SLC29A4Q7RTT9 530 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 ERMP1Q7Z2K6 904 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 VTCN1Q7Z7D3 282 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 ZAR1Q86SH2 424 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 ARMC8Q8IUR7 673 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 ZNF619Q8N2I2 560 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 BCORP1Q8N888 145 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 OR10Q1Q8NGQ4 319 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 NUBPLQ8TB37 319 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 M1APQ8TC57 530 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 ELP5Q8TE02 316 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 TP53INP1Q96A56 240 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 ZG16BQ96DA0 208 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 EFHD1Q9BUP0 239 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 SPATA5L1Q9BVQ7 753 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 CHID1Q9BWS9 393 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 KCNE5Q9UJ90 142 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 RIMS3Q9UJD0 308 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 ANGPTL2Q9UKU9 493 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 MKLN1Q9UL63 735 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 CBLCQ9ULV8 474 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 PCDHGA10Q9Y5H3 936 aa13.63□□□□□ -0.23
SHKBP1-211ENST00000595945 CFAP54Q96N23 3096 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 PRAMEF25A6NGN4 478 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 AGAP5A6NIR3 686 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 TMEM200CA6NKL6 621 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 NPIPB9F8W1W9 429 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 ACOX3O15254 700 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 TPST1O60507 370 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 TIPRLO75663 272 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 EPPINO95925 133 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 ALPPP05187 535 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 PABPC4LP0CB38 370 aaKnown RBP13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 SLC34A1Q06495 639 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 EXT1Q16394 746 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 NNATQ16517 81 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 DUSP7Q16829 419 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 PLAG1Q6DJT9 500 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 HMBOX1Q6NT76 420 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 HSDL2Q6YN16 418 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 NDUFAF7Q7L592 441 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 PIWIL3Q7Z3Z3 882 aaKnown RBP13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 PQLC1Q8N2U9 271 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 TMEM102Q8N9M5 508 aaPredicted RBP13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 ADAMTS17Q8TE56 1095 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 RASSF5Q8WWW0 418 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 HSPBAP1Q96EW2 488 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 C7orf34Q96L11 122 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 PKP2Q99959 881 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 C6orf203Q9P0P8 240 aaPredicted RBP13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 KCND3Q9UK17 655 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 OR10H1Q9Y4A9 318 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 APC2O95996 2303 aa13.62□□□□□ -0.23
SHKBP1-211ENST00000595945 PCNX3Q9H6A9 2034 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 TRBV11-1A0A0K0K1C0 115 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 CENPVL1A0A0U1RR11 272 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 SYT5O00445 386 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 ZFAND5O76080 213 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 NADKO95544 446 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 IL33O95760 270 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 BAG2O95816 211 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 CAPNS1P04632 268 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 THBS1P07996 1170 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 LIPCP11150 499 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 FCGR1AP12314 374 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 LCN1P31025 176 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 PRKAR1BP31321 381 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 OTX2P32243 289 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 NR0B1P51843 470 aaKnown RBP13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 IL10RAQ13651 578 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 SNCBQ16143 134 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 IFI44LQ53G44 452 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 HLA-DQA1Q5Y7H0 255 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 TSEN54Q7Z6J9 526 aaKnown RBP13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 COMTD1Q86VU5 262 aa13.61□□□□□ -0.23
SHKBP1-211ENST00000595945 SLC34A3Q8N130 599 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms