RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TIMP3P35625 211 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 FRKP42685 505 aaPredicted RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 ASMTP46597 345 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 RFX3P48380 749 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 MANFP55145 182 aaKnown RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 TLE4Q04727 773 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 ZNHIT3Q15649 155 aaPredicted RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 HSPB2Q16082 182 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 DECR1Q16698 335 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 SLC25A35Q3KQZ1 300 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 CES4AQ5XG92 561 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 NSUN5P2Q63ZY6 315 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 IFNEQ86WN2 208 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 TRIM42Q8IWZ5 723 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 DMRTC2Q8IXT2 367 aaPredicted RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 RELL2Q8NC24 303 aaPredicted RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 ZFP28Q8NHY6 868 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 ZBTB9Q96C00 473 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 ZBED6CLQ96FA7 236 aaPredicted RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 PKNOX2Q96KN3 472 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 PPP3R2Q96LZ3 170 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 RTN4RQ9BZR6 473 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 TAS2R10Q9NYW0 307 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 PPP4R1LQ9P1A2 415 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 DKKL1Q9UK85 242 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 RAB21Q9UL25 225 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 NUP214P35658 2090 aaPredicted RBP12.6□□□□□ -0.39
APOC1-208ENST00000592535 WDR91A4D1P6 747 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 CD8B2A6NJW9 211 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 ENO4A6NNW6 628 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 TMEM114B3SHH9 223 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 LYPLA1O75608 230 aaPredicted RBP12.6□□□□□ -0.39
APOC1-208ENST00000592535 IL33O95760 270 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 IGKV1D-16P01601 117 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 CPN1P15169 458 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 MAPK1P28482 360 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 SERPINB4P48594 390 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 STARP49675 285 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 ZNF136P52737 540 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 PRKAG1P54619 331 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 GFRA1P56159 465 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 DLX5P56178 289 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 STX5Q13190 355 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 SF3B4Q15427 424 aaKnown RBP eCLIP12.6□□□□□ -0.39
APOC1-208ENST00000592535 C6orf136Q5SQH8 315 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 POMZP3Q6PJE2 187 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 SZRD1Q7Z422 152 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 EXOC3L1Q86VI1 746 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 MED12LQ86YW9 2145 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 NUDCD3Q8IVD9 361 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 NUP43Q8NFH3 380 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 OR4K17Q8NGC6 315 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 FBXO30Q8TB52 745 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 PIK3R3Q92569 461 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 MTERF3Q96E29 417 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 SFXN2Q96NB2 322 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 TUBA1CQ9BQE3 449 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 C1orf50Q9BV19 199 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 MCCC2Q9HCC0 563 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 ACSS1Q9NUB1 689 aaPredicted RBP12.6□□□□□ -0.39
APOC1-208ENST00000592535 ATP6V1HQ9UI12 483 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 MRTO4Q9UKD2 239 aaKnown RBP12.6□□□□□ -0.39
APOC1-208ENST00000592535 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 LRBAP50851 2863 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 ADGRG4Q8IZF6 3080 aa12.6□□□□□ -0.39
APOC1-208ENST00000592535 MYO9AB2RTY4 2548 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 MBD3L4A6NDZ8 208 aaPredicted RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 MBD3L3A6NE82 208 aaPredicted RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 MBD3L5A6NJ08 208 aaPredicted RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 TTC36A6NLP5 189 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 H0Y3Z8 333 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 DVL2O14641 736 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 SCAMP2O15127 329 aaKnown RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 ITM2AO43736 263 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 ZIC3O60481 467 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 NKX2-2O95096 273 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 UTS2O95399 124 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 IL2RAP01589 272 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 ACP2P11117 423 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 BMP5P22003 454 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 DPP4P27487 766 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 HPCAL1P37235 193 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 MAP3K8P41279 467 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 SRYQ05066 204 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 SNTB1Q13884 538 aaKnown RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 RCAN2Q14206 197 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 PTGR1Q14914 329 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 ATP6AP1LQ52LC2 224 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 CEP85LQ5SZL2 805 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 ENPP6Q6UWR7 440 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 PLXDC2Q6UX71 529 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 R3HCC1LQ7Z5L2 792 aaKnown RBP12.59□□□□□ -0.39
APOC1-208ENST00000592535 FADS6Q8N9I5 356 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 OR2M3Q8NG83 312 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 OR7A2PQ8NGA2 310 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 CEP70Q8NHQ1 597 aa12.59□□□□□ -0.39
APOC1-208ENST00000592535 MBD3L2Q8NHZ7 208 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms