RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CENPEQ02224 2701 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 CREBBPQ92793 2442 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 CACNA1DQ01668 2161 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 POLEQ07864 2286 aa9.21□□□□□ -0.93
BRCA1-227ENST00000591849 CROCCQ5TZA2 2017 aa9.21□□□□□ -0.93
BRCA1-227ENST00000591849 GXYLT2A0PJZ3 443 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 OR14I1A6ND48 311 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 LRRC3CA6NJW4 275 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 E9PLN8 166 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 AQP7O14520 342 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 SDHDO14521 159 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 KLF11O14901 512 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 SNPHO15079 494 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 CBR3O75828 277 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 IL33O95760 270 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 IGHG3P01860 377 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 ATP6V1C1P21283 382 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 OCRLQ01968 901 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 LASP1Q14847 261 aaKnown RBP9.21□□□□□ -0.94
BRCA1-227ENST00000591849 ZCCHC12Q6PEW1 402 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 RPTNQ6XPR3 784 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 ACAD11Q709F0 780 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 MAMDC2Q7Z304 686 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-227ENST00000591849 FGD2Q7Z6J4 655 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 RIMKLAQ8IXN7 391 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 OR10Q1Q8NGQ4 319 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 OR14L1PQ8NHC6 308 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 NUDT8Q8WV74 236 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 PIK3R3Q92569 461 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 MOAP1Q96BY2 351 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 FAM120BQ96EK7 910 aaKnown RBP9.21□□□□□ -0.94
BRCA1-227ENST00000591849 C16orf58Q96GQ5 468 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 CCDC120Q96HB5 630 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 SH3GL2Q99962 352 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 VKORC1Q9BQB6 163 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 G6PC3Q9BUM1 346 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 TBL1XR1Q9BZK7 514 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 TP63Q9H3D4 680 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-227ENST00000591849 ZNF703Q9H7S9 590 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-227ENST00000591849 ACKR4Q9NPB9 350 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 SERHLQ9NQF3 203 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 COQ3Q9NZJ6 369 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 PPP4R1LQ9P1A2 415 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 PLEKHB1Q9UF11 243 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-227ENST00000591849 DKKL1Q9UK85 242 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 C15orf41Q9Y2V0 281 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 ITPR2Q14571 2701 aa9.21□□□□□ -0.94
BRCA1-227ENST00000591849 A0A1B0GVC2 190 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 PRSS51A0A1B0GVH4 220 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 WIPF3A6NGB9 483 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 UBDO15205 165 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 SOX30O94993 753 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 NKX2-2O95096 273 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 UTS2O95399 124 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 PSMG1O95456 288 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 HMGN2P05204 90 aaKnown RBP9.2□□□□□ -0.94
BRCA1-227ENST00000591849 ACP2P11117 423 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 IDO1P14902 403 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 EVI2BP34910 448 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 CHI3L1P36222 383 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-227ENST00000591849 C21orf58P58505 322 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 STX1BP61266 288 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 POU6F2P78424 691 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-227ENST00000591849 STX5Q13190 355 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 SF3B4Q15427 424 aaKnown RBP eCLIP9.2□□□□□ -0.942e-6■■■□□ 15.1
BRCA1-227ENST00000591849 DPY19L1Q2PZI1 675 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 EIPR1Q53HC9 387 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 HSP90B2PQ58FF3 399 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 WIPI1Q5MNZ9 446 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-227ENST00000591849 OR5M10Q6IEU7 315 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 OGFOD2Q6N063 350 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 MFSD12Q6NUT3 480 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 TMEM81Q6P7N7 255 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 FIGNL1Q6PIW4 674 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 XKRXQ6PP77 449 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 YRDCQ86U90 279 aaKnown RBP9.2□□□□□ -0.94
BRCA1-227ENST00000591849 PLCZ1Q86YW0 608 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 ZNF808Q8N4W9 903 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-227ENST00000591849 SLC16A11Q8NCK7 471 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 OR5AK3PQ8NH89 298 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 NEIL3Q8TAT5 605 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 SFXN5Q8TD22 340 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 OTUB1Q96FW1 271 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-227ENST00000591849 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 ACTRT3Q9BYD9 372 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 CXorf36Q9H7Y0 433 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 PTGES2Q9H7Z7 377 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 PLSCR2Q9NRY7 297 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 PNPLA3Q9NST1 481 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 SIRT3Q9NTG7 399 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-227ENST00000591849 AIG1Q9NVV5 245 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 NTMQ9P121 344 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 TNFRSF10DQ9UBN6 386 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 WIF1Q9Y5W5 379 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 USH1CQ9Y6N9 552 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 ZGRF1Q86YA3 2104 aa9.2□□□□□ -0.94
BRCA1-227ENST00000591849 DIDO1Q9BTC0 2240 aaKnown RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 RNF103-CHMP3A0A140T963 221 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms