RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 ZNF628Q5EBL2 1059 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 ALKBH2Q6NS38 261 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 FAM214BQ7L5A3 538 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 WFDC8Q8IUA0 241 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 SLC44A2Q8IWA5 706 aaPredicted RBP14.29□□□□□ -0.12
DDX39A-216ENST00000591275 CCDC116Q8IYX3 515 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 ZNF611Q8N823 705 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 PTGR2Q8N8N7 351 aaPredicted RBP14.29□□□□□ -0.12
DDX39A-216ENST00000591275 FADS6Q8N9I5 356 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 OR2M3Q8NG83 312 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 PHF21BQ96EK2 531 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 VSTM2LQ96N03 204 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 FOLH1BQ9HBA9 442 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 UTS2RQ9UKP6 389 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 CLEC4AQ9UMR7 237 aa14.29□□□□□ -0.12
DDX39A-216ENST00000591275 CCDC188H7C350 402 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 KLHL2O95198 593 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 TP53P04637 393 aaPredicted RBP14.28□□□□□ -0.12
DDX39A-216ENST00000591275 TUBBP07437 444 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 CTAGE8P0CG41 777 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 EVI2BP34910 448 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 PNLIPRP2P54317 469 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 PODNL1Q6PEZ8 512 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 STAC2Q6ZMT1 411 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 RPS27LQ71UM5 84 aaKnown RBP14.28□□□□□ -0.12
DDX39A-216ENST00000591275 CCDC25Q86WR0 208 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 CTAGE4Q8IX94 777 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 OR9A2Q8NGT5 310 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 AKAP1Q92667 903 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDX39A-216ENST00000591275 GPR78Q96P69 363 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 HBEGFQ99075 208 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 NTMT1Q9BV86 223 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 FAIM2Q9BWQ8 316 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 REG4Q9BYZ8 158 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 ELOVL6Q9H5J4 265 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 ZBTB26Q9HCK0 441 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 YAE1D1Q9NRH1 226 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 FLRT3Q9NZU0 649 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 RNF14Q9UBS8 474 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 OR10H1Q9Y4A9 318 aa14.28□□□□□ -0.12
DDX39A-216ENST00000591275 A0A096LPK6 155 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 HMX2A2RU54 273 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 SHISA8B8ZZ34 492 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 ESRRBO95718 433 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 PDYNP01213 254 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 IFNA2P01563 188 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 PPP3CBP16298 524 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 SLC6A8P48029 635 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 RPS4XP62701 263 aaKnown RBP14.27□□□□□ -0.13
DDX39A-216ENST00000591275 SGCBQ16585 318 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 ERCC6LQ2NKX8 1250 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 SH2D4BQ5SQS7 431 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 KLC3Q6P597 504 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 MILR1Q7Z6M3 343 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 C1orf52Q8N6N3 182 aaKnown RBP14.27□□□□□ -0.13
DDX39A-216ENST00000591275 OR4F6Q8NGB9 312 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 RAB3IL1Q8TBN0 382 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 ZNF675Q8TD23 568 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 EXOSC8Q96B26 276 aaKnown RBP14.27□□□□□ -0.13
DDX39A-216ENST00000591275 TMEM204Q9BSN7 226 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 RTN4RQ9BZR6 473 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 STMN4Q9H169 189 aaPredicted RBP14.27□□□□□ -0.13
DDX39A-216ENST00000591275 GRHL1Q9NZI5 618 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 WHRNQ9P202 907 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 PCTPQ9UKL6 214 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 EMC9Q9Y3B6 208 aa14.27□□□□□ -0.13
DDX39A-216ENST00000591275 CCDC189A1A4V9 331 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 GMFGO60234 142 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 TMCC2O75069 709 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 BCAS2O75934 225 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-216ENST00000591275 PLGP00747 810 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-216ENST00000591275 STX2P32856 288 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 RPS3AP61247 264 aaKnown RBP14.26□□□□□ -0.13
DDX39A-216ENST00000591275 TECRLQ5HYJ1 363 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 METTL2BQ6P1Q9 378 aaKnown RBP14.26□□□□□ -0.13
DDX39A-216ENST00000591275 HIPK1Q86Z02 1210 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 PLD6Q8N2A8 252 aaKnown RBP14.26□□□□□ -0.13
DDX39A-216ENST00000591275 METTL25Q8N6Q8 603 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 MNS1Q8NEH6 495 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 UHMK1Q8TAS1 419 aaKnown RBP14.26□□□□□ -0.13
DDX39A-216ENST00000591275 SELENOMQ8WWX9 145 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 TMEM158Q8WZ71 300 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 ERP44Q9BS26 406 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 PRRG4Q9BZD6 226 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 ACTR6Q9GZN1 396 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 VPS11Q9H270 941 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 PLSCR4Q9NRQ2 329 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 SAR1BQ9Y6B6 198 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 CADP27708 2225 aa14.26□□□□□ -0.13
DDX39A-216ENST00000591275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■■■■ 33.6
DDX39A-216ENST00000591275 ALPK2Q86TB3 2170 aa14.25□□□□□ -0.13
DDX39A-216ENST00000591275 PPP6CO00743 305 aa14.25□□□□□ -0.13
DDX39A-216ENST00000591275 FADS1O60427 444 aa14.25□□□□□ -0.13
DDX39A-216ENST00000591275 ALDOAP04075 364 aaKnown RBP14.25□□□□□ -0.13
DDX39A-216ENST00000591275 SOD3P08294 240 aa14.25□□□□□ -0.13
DDX39A-216ENST00000591275 IL3P08700 152 aa14.25□□□□□ -0.13
DDX39A-216ENST00000591275 FCGR2AP12318 317 aa14.25□□□□□ -0.13
DDX39A-216ENST00000591275 TSPAN8P19075 237 aa14.25□□□□□ -0.13
DDX39A-216ENST00000591275 ACVR1BP36896 505 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms