RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ADAMTS14Q8WXS8 1223 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 ADIPOR1Q96A54 375 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 BDH2Q9BUT1 245 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 SEMA4CQ9C0C4 833 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 POLR1BQ9H9Y6 1135 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 FBXO34Q9NWN3 711 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 DNAJB9Q9UBS3 223 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 CBLCQ9ULV8 474 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 ABCG2Q9UNQ0 655 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 C2orf92A0A1B0GVN3 265 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 hCG_2039718K7EN88 272 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 CAPNS1P04632 268 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 TNFRSF1BP20333 461 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 DRD5P21918 477 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 LRRC36Q1X8D7 754 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 ZNF311Q5JNZ3 666 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 HMGN2P46Q86SG4 172 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 PEX5LQ8IYB4 626 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 GALNT15Q8N3T1 639 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 APCDD1LQ8NCL9 501 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 APOBEC4Q8WW27 367 aaKnown RBP16.15■□□□□ 0.18
CXXC1-212ENST00000589940 LCORQ96JN0 433 aaPredicted RBP16.15■□□□□ 0.18
CXXC1-212ENST00000589940 ZNF354BQ96LW1 612 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 GAL3ST4Q96RP7 486 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 PINK1Q9BXM7 581 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 VCX3BQ9H321 246 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 TRIM45Q9H8W5 580 aaPredicted RBP16.15■□□□□ 0.18
CXXC1-212ENST00000589940 CACYBPQ9HB71 228 aaKnown RBP16.15■□□□□ 0.18
CXXC1-212ENST00000589940 SDK2Q58EX2 2172 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 FRG2CA6NGY1 282 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 SEC24DO94855 1032 aaPredicted RBP16.14■□□□□ 0.17
CXXC1-212ENST00000589940 PRSS23O95084 383 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 OR1E2P47887 323 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 GABREP78334 506 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 KCNC4Q03721 635 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 PUM1Q14671 1186 aaKnown RBP eCLIP16.14■□□□□ 0.174e-7■■□□□ 11.8
CXXC1-212ENST00000589940 GPR68Q15743 365 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 IQCCQ4KMZ1 466 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 MARCH9Q86YJ5 346 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 NLGN4XQ8N0W4 816 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 ICA1LQ8NDH6 482 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 NLGN4YQ8NFZ3 816 aaPredicted RBP16.14■□□□□ 0.17
CXXC1-212ENST00000589940 OR52P1PQ8NH57 321 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 G6PC3Q9BUM1 346 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 WWTR1Q9GZV5 400 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 NXF5Q9H1B4 397 aaKnown RBP16.14■□□□□ 0.17
CXXC1-212ENST00000589940 THSD1Q9NS62 852 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 IFT52Q9Y366 437 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 PRAMEF25A6NGN4 478 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 AGAP5A6NIR3 686 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 GFRA3O60609 400 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 IGKV1D-16P01601 117 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 IGHEP01854 428 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 ATP6V1C1P21283 382 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 PRKAR1BP31321 381 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 GRAMD1BQ3KR37 738 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 HLA-DQA1Q5Y7H0 255 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 BCORP1Q8N888 145 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 EME1Q96AY2 570 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 VMP1Q96GC9 406 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 VPS50Q96JG6 964 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 NTN4Q9HB63 628 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 NDUFAF4Q9P032 175 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 CDV3Q9UKY7 258 aaKnown RBP16.14■□□□□ 0.17
CXXC1-212ENST00000589940 TCFL5Q9UL49 500 aa16.14■□□□□ 0.17
CXXC1-212ENST00000589940 AHCTF1Q8WYP5 2266 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 STMND1H3BQB6 276 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 IFNW1P05000 195 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 ITGA2P17301 1181 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 RPS4Y1P22090 263 aaKnown RBP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 MMP11P24347 488 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 RFX3P48380 749 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 SLC26A5P58743 744 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 FLYWCH1Q4VC44 716 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 DHRS4L2Q6PKH6 230 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 ZAR1Q86SH2 424 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 VRK2Q86Y07 508 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 CATSPER1Q8NEC5 780 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 C17orf47Q8NEP4 570 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 TACO1Q9BSH4 297 aaKnown RBP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 KLHL4Q9C0H6 718 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 ZNF223Q9UK11 482 aaPredicted RBP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 FARSAQ9Y285 508 aaKnown RBP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 HS3ST3B1Q9Y662 390 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 SYT5O00445 386 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 GNGT2O14610 69 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 PEX1O43933 1283 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 PRKNO60260 465 aaPredicted RBP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 LGI1O95970 557 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 DBIP07108 87 aaKnown RBP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 THBS1P07996 1170 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 STAT5AP42229 794 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 RPS15P62841 145 aaKnown RBP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 RNF4P78317 190 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 LARS2Q15031 903 aaKnown RBP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 PCOLCEQ15113 449 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 DECR1Q16698 335 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.13■□□□□ 0.17
CXXC1-212ENST00000589940 HSDL2Q6YN16 418 aa16.13■□□□□ 0.17
CXXC1-212ENST00000589940 TSEN54Q7Z6J9 526 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms