RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SFTPCP11686 197 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 SLC6A2P23975 617 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 LCN1P31025 176 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 FBXW4P57775 412 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 SELPLGQ14242 412 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 OR1C1Q15619 314 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.54□□□□□ -0.4
VMP1-210ENST00000589823 LACTB2Q53H82 288 aaPredicted RBP12.54□□□□□ -0.4
VMP1-210ENST00000589823 RABL3Q5HYI8 236 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 CCNJQ5T5M9 372 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 HEPHL1Q6MZM0 1159 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 C8orf82Q6P1X6 216 aaPredicted RBP12.54□□□□□ -0.4
VMP1-210ENST00000589823 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 IGFL3Q6UXB1 125 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 ASB18Q6ZVZ8 466 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 NUP54Q7Z3B4 507 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 OR10A6Q8NH74 314 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 FAM110BQ8TC76 370 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 TMCO6Q96DC7 493 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 SGCZQ96LD1 299 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 SPATA9Q9BWV2 254 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 KAT8Q9H7Z6 458 aaKnown RBP12.54□□□□□ -0.4
VMP1-210ENST00000589823 TRIM45Q9H8W5 580 aaPredicted RBP12.54□□□□□ -0.4
VMP1-210ENST00000589823 POLE3Q9NRF9 147 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 CALML5Q9NZT1 146 aa12.54□□□□□ -0.4
VMP1-210ENST00000589823 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.54□□□□□ -0.4
VMP1-210ENST00000589823 C5orf58C9J3I9 102 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 EBAG9O00559 213 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 UGT2B11O75310 529 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 TNFRSF21O75509 655 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 STX11O75558 287 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 IGKV1D-16P01601 117 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 BCHEP06276 602 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 BMP2P12643 396 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 CYP4B1P13584 511 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 CD46P15529 392 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 SLC7A2P52569 658 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 GABPB1Q06547 395 aaPredicted RBP12.53□□□□□ -0.4
VMP1-210ENST00000589823 SYPL1Q16563 259 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 FLYWCH1Q4VC44 716 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 SPINK14Q6IE38 97 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 GALNT10Q86SR1 603 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 SERPINA11Q86U17 422 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 PGAM4Q8N0Y7 254 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 METTL25Q8N6Q8 603 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 GOLM1Q8NBJ4 401 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 SIGLEC12Q96PQ1 595 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 TRNT1Q96Q11 434 aaKnown RBP12.53□□□□□ -0.4
VMP1-210ENST00000589823 SECISBP2Q96T21 854 aaKnown RBP12.53□□□□□ -0.4
VMP1-210ENST00000589823 SDF2Q99470 211 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 A4GALTQ9NPC4 353 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 SPAG4Q9NPE6 437 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 TIMMDC1Q9NPL8 285 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 ADA2Q9NZK5 511 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 CPAMD8Q8IZJ3 1885 aa12.53□□□□□ -0.4
VMP1-210ENST00000589823 TRAV17A0A0B4J275 112 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 K7EM74 188 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 HNRNPCL1O60812 293 aaKnown RBP12.52□□□□□ -0.41
VMP1-210ENST00000589823 SLC25A12O75746 678 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 ATP5HO75947 161 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 NEURL1O76050 574 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 UTS2O95399 124 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 H6PDO95479 791 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 PDGFAP04085 211 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 P04436 131 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 NUDT7P0C024 238 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 ARAFP10398 606 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 HPGDP15428 266 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 CLK3P49761 638 aaKnown RBP12.52□□□□□ -0.41
VMP1-210ENST00000589823 TNFSF10P50591 281 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 CRISP3P54108 245 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 RBBP4Q09028 425 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 BNIP1Q12981 228 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 GPR68Q15743 365 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 ZNF630Q2M218 657 aaPredicted RBP12.52□□□□□ -0.41
VMP1-210ENST00000589823 SLC22A10Q63ZE4 541 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 LRRC74BQ6ZQY2 392 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 CCDC121Q6ZUS5 278 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 NET1Q7Z628 596 aaPredicted RBP12.52□□□□□ -0.41
VMP1-210ENST00000589823 SLC15A3Q8IY34 581 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 DEFB107AQ8IZN7 70 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 C10orf111Q8N326 155 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 ANKFN1Q8N957 763 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 EXD3Q8N9H8 876 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 C11orf65Q8NCR3 313 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 RBM15BQ8NDT2 890 aaKnown RBP12.52□□□□□ -0.41
VMP1-210ENST00000589823 MDS2Q8NDY4 140 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 CATSPER1Q8NEC5 780 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 OR10G3Q8NGC4 313 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 FBXO27Q8NI29 283 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 SPPL2AQ8TCT8 520 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 PAQR8Q8TEZ7 354 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 HGDQ93099 445 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 TMEM19Q96HH6 336 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 ZNF350Q9GZX5 532 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 HOXD1Q9GZZ0 328 aa12.52□□□□□ -0.41
VMP1-210ENST00000589823 C1orf21Q9H246 121 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms