RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 MSX1P28360 303 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 SOX18P35713 384 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 PEX19P40855 299 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 PTGDSP41222 190 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 PRIM2P49643 509 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 MANFP55145 182 aaKnown RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 PRR5P85299 388 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 ZNF844Q08AG5 666 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 KIAA0040Q15053 153 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 ACSF3Q4G176 576 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 XKR7Q5GH72 579 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 WIPI1Q5MNZ9 446 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 FNDC7Q5VTL7 733 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 Q6ZSR9 355 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 WDR53Q7Z5U6 358 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 PLCZ1Q86YW0 608 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 CCDC71Q8IV32 467 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 FNDC5Q8NAU1 212 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 CLHC1Q8NHS4 586 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 ABTB1Q969K4 478 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 EFHD2Q96C19 240 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 ELP4Q96EB1 424 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 ZIM3Q96PE6 472 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 PRPF18Q99633 342 aaKnown RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 LMF2Q9BU23 707 aaKnown RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 UGT2B28Q9BY64 529 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 PARD6BQ9BYG5 372 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 TUBB1Q9H4B7 451 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 EQTNQ9NQ60 294 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 SERHLQ9NQF3 203 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 ACSS1Q9NUB1 689 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 RAB21Q9UL25 225 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 SLC6A5Q9Y345 797 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 ACTL7BQ9Y614 415 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 ACANP16112 2415 aa9.66□□□□□ -0.86
CLPTM1-211ENST00000589347 A0A0G2JNJ9 132 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 NKX2-6A6NCS4 301 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 TMEM233B4DJY2 109 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 H0Y3Z8 333 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 UPK1AO00322 258 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 SCAMP2O15127 329 aaKnown RBP9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 BIRC5O15392 142 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 SCO2O43819 266 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 TYROBPO43914 113 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 LYPLA1O75608 230 aaPredicted RBP9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 ZWINTO95229 277 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 PSMG1O95456 288 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 EPPINO95925 133 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 SERPINE1P05121 402 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 BCKDHAP12694 445 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 CYP4B1P13584 511 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 GRK2P25098 689 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 TACR1P25103 407 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 SERPINB4P48594 390 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 PSG6Q00889 435 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 PDE7AQ13946 482 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 CDSNQ15517 529 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 EIPR1Q53HC9 387 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 CEP85LQ5SZL2 805 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 VASNQ6EMK4 673 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 RTL6Q6ICC9 239 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 ANKRD26P1Q6NSI1 321 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 YRDCQ86U90 279 aaKnown RBP9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 CDH24Q86UP0 819 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 CDRT4Q8N9R6 151 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 NUP43Q8NFH3 380 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 CIDECQ96AQ7 238 aaPredicted RBP9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 TUBGCP3Q96CW5 907 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 C14orf79Q96F83 325 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 EGLN2Q96KS0 407 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 SFXN2Q96NB2 322 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 TRIB1Q96RU8 372 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 TIMP4Q99727 224 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 TBL1XR1Q9BZK7 514 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 ENKD1Q9H0I2 346 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 PTGES2Q9H7Z7 377 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 NEUROD4Q9HD90 331 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 FAM120CQ9NX05 1096 aaKnown RBP9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 Q9UFV3 132 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 EIF3LQ9Y262 564 aaKnown RBP9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 HRH3Q9Y5N1 445 aa9.65□□□□□ -0.86
CLPTM1-211ENST00000589347 CD8B2A6NJW9 211 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 EMC8O43402 210 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 PEX11AO75192 247 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 IL33O95760 270 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 KRT16P08779 473 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 BMP7P18075 431 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 CAPN3P20807 821 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 TIMP3P35625 211 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 FRKP42685 505 aaPredicted RBP9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 ETV4P43268 484 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 RFX3P48380 749 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 ASCL1P50553 236 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 PRKAG1P54619 331 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 DSCR4P56555 118 aaPredicted RBP9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 KRTAP10-9P60411 292 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 MLC1Q15049 377 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 CHI3L2Q15782 390 aa9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 RFTN2Q52LD8 501 aaPredicted RBP9.64□□□□□ -0.87
CLPTM1-211ENST00000589347 NSUN5P2Q63ZY6 315 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms