RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ST13P50502 369 aaKnown RBP13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 CASP9P55211 416 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 KRT72Q14CN4 511 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 INAQ16352 499 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 RUNDC3AQ59EK9 446 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC6A19Q695T7 634 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 FIGNL1Q6PIW4 674 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 ARPINQ7Z6K5 226 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 FBXW8Q8N3Y1 598 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 CHDHQ8NE62 594 aaPredicted RBP13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 CATSPER1Q8NEC5 780 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 PAQR8Q8TEZ7 354 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 LRRC58Q96CX6 371 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 ANKRD27Q96NW4 1050 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 THUMPD3Q9BV44 507 aaKnown RBP13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 SERHL2Q9H4I8 314 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 METTL7AQ9H8H3 244 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 HHATLQ9HCP6 504 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 KLHL1Q9NR64 748 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 CALML5Q9NZT1 146 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 SLAMF8Q9P0V8 285 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 MAP10Q9P2G4 905 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 P2RX2Q9UBL9 471 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 AP3M1Q9Y2T2 418 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 GMEB1Q9Y692 573 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 TNRC6AQ8NDV7 1962 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 EPG5Q9HCE0 2579 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 CACNA1GO43497 2377 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 EIF4E1BA6NMX2 242 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 HMGN4O00479 90 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 UGT2B11O75310 529 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 STX11O75558 287 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 UNC5CO95185 931 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 NR2F1P10589 423 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 HPGDP15428 266 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 NUDT2P50583 147 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 CAPRIN1Q14444 709 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 RGNQ15493 299 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 ARHGAP11BQ3KRB8 267 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 GPAT3Q53EU6 434 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 COX20Q5RI15 118 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 PCSK4Q6UW60 755 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 HACD2Q6Y1H2 254 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 MSRB3Q8IXL7 192 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 FITM2Q8N6M3 262 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 ZNF527Q8NB42 609 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 OR8J3Q8NGG0 315 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 SPPL2AQ8TCT8 520 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 RAB8BQ92930 207 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 SCMH1Q96GD3 660 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 CPPED1Q9BRF8 314 aaPredicted RBP13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 CACYBPQ9HB71 228 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 POLE3Q9NRF9 147 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 NDE1Q9NXR1 346 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 KLRF1Q9NZS2 232 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 ABCG2Q9UNQ0 655 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 CSAG2Q9Y5P2 127 aa13.41□□□□□ -0.26
SCAMP4-209ENST00000585335 PRAMEF25A6NGN4 478 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 C5orf58C9J3I9 102 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC28A2O43868 658 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 CCL3P10147 92 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 ESRRAP11474 423 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 CYP4B1P13584 511 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 ETFAP13804 333 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 GPX2P18283 190 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 CNR1P21554 472 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 KCNJ2P63252 427 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 MXRA7P84157 204 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 SNTA1Q13424 505 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 CYP51A1Q16850 503 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 NADK2Q4G0N4 442 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 FLYWCH1Q4VC44 716 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 GCNT6Q5T4J0 391 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 CCNJQ5T5M9 372 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 HEPHL1Q6MZM0 1159 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 TMEM81Q6P7N7 255 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 TRPM8Q7Z2W7 1104 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 GALNTL5Q7Z4T8 443 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 MDGA2Q7Z553 956 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 ZNF227Q86WZ6 799 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 POGLUT1Q8NBL1 392 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 FAM110BQ8TC76 370 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 HGDQ93099 445 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 DTNBP1Q96EV8 351 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 TRNT1Q96Q11 434 aaKnown RBP13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 SDF2Q99470 211 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 HOPXQ9BPY8 73 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 FAM173AQ9BQD7 235 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 SPATA9Q9BWV2 254 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 OSBPL11Q9BXB4 747 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 TBL1XR1Q9BZK7 514 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 SDHAF3Q9NRP4 125 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 UBQLN4Q9NRR5 601 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 ANAPC2Q9UJX6 822 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 L3MBTL1Q9Y468 752 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 WDR45Q9Y484 360 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms