RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MGAT4BQ9UQ53 548 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 TPRKBQ9Y3C4 175 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 OR10H1Q9Y4A9 318 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 MMACHCQ9Y4U1 282 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 LYVE1Q9Y5Y7 322 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 KCNE3Q9Y6H6 103 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 MAU2Q9Y6X3 613 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 HSPE1-MOB4S4R3N1 261 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 KIF26BQ2KJY2 2108 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 MN1Q10571 1320 aaPredicted RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 SMIM31A0A1B0GVY4 71 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 A6NHS1 94 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 J3KTA2 159 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 DLGAP1O14490 977 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 DSCR3O14972 297 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 SLC16A6O15403 523 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 ZNF749O43361 778 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 NOL3O60936 208 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 CSO75390 466 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 CLIC3O95833 236 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 RPLP0P05388 317 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 DBIP07108 87 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 HBQ1P09105 142 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 CYP4B1P13584 511 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 PRKAR1BP31321 381 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 RYKP34925 604 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 STT3AP46977 705 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 GABRA4P48169 554 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 PSMD4P55036 377 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 NUP107P57740 925 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 CSNK2BP67870 215 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 TUBA4AP68366 448 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 CCL7P80098 99 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 OCA2Q04671 838 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 ST3GAL3Q11203 375 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 NPRL3Q12980 569 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 CAMK2BQ13554 666 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 COL9A2Q14055 689 aaPredicted RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 KEAP1Q14145 624 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 NR1D2Q14995 579 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 RTP5Q14D33 572 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 DUSP5Q16690 384 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 MINDY4Q4G0A6 757 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 LIN52Q52LA3 116 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 DCST2Q5T1A1 773 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 HLA-DQA1Q5Y7H0 255 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 PLEKHM3Q6ZWE6 761 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 USP51Q70EK9 711 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 WDR53Q7Z5U6 358 aaPredicted RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 RANBP3LQ86VV4 465 aaPredicted RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 P3H2Q8IVL5 708 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 DEPDC4Q8N2C3 294 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 ZNF619Q8N2I2 560 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 SLC5A8Q8N695 610 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 TMEM52Q8NDY8 209 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 DOK4Q8TEW6 326 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 HDAC2Q92769 488 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 SLC38A4Q969I6 547 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 GIMAP5Q96F15 307 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 OR1F2PQ96R84 312 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 GFM1Q96RP9 751 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 MBOAT4Q96T53 435 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 SDF2Q99470 211 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 G6PC3Q9BUM1 346 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 LRRN3Q9H3W5 708 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 ZNF768Q9H5H4 540 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 CXorf21Q9HAI6 301 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 NMNAT1Q9HAN9 279 aaPredicted RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 Q9N2J8 555 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 FGF21Q9NSA1 209 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 ACER3Q9NUN7 267 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 IMPAD1Q9NX62 359 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 SELENONQ9NZV5 590 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 AKAP7Q9P0M2 348 aaPredicted RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 RHCGQ9UBD6 479 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 MRTO4Q9UKD2 239 aaKnown RBP8.65□□□□□ -1.02
SS18-220ENST00000582092 RARRES3Q9UL19 164 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 MKLN1Q9UL63 735 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 SATB2Q9UPW6 733 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 CFL2Q9Y281 166 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 CLCA3PQ9Y6N3 262 aa8.65□□□□□ -1.02
SS18-220ENST00000582092 CEP295Q9C0D2 2601 aa8.65□□□□□ -1.03
SS18-220ENST00000582092 LY6G6EA0A0G2JKS1 128 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 A0A1B0GX78 115 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ARRDC5A6NEK1 342 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 M0R3H8 397 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 PCDH17O14917 1159 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 MITFO75030 526 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 NME6O75414 186 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 CTSBP07858 339 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ACP2P11117 423 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 FOLR1P15328 257 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 GSTM3P21266 225 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 MAOAP21397 527 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 POU1F1P28069 291 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 RBMS1P29558 406 aaKnown RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 CSTF2P33240 577 aaKnown RBP eCLIP8.64□□□□□ -1.03
SS18-220ENST00000582092 GALNSP34059 522 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms