RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 PMPCAQ10713 525 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 TOMM20Q15388 145 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 DECR1Q16698 335 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 ZNF630Q2M218 657 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 CPTPQ5TA50 214 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 RTL6Q6ICC9 239 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 NATD1Q8N6N6 113 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 CDRT4Q8N9R6 151 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 FAM83FQ8NEG4 500 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 PSMA8Q8TAA3 256 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 MGARPQ8TDB4 240 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 SDCCAG3Q96C92 435 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 PRPF18Q99633 342 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 TIMP4Q99727 224 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 NUF2Q9BZD4 464 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 MEAF6Q9HAF1 191 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 Q9N2J8 555 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 EQTNQ9NQ60 294 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 SIRT3Q9NTG7 399 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 ATAD3AQ9NVI7 634 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 THAP1Q9NVV9 213 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 NOP53Q9NZM5 478 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 PCDHGB3Q9Y5G1 929 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 FAM215AQ9Y5M1 114 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 WIF1Q9Y5W5 379 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 CSMD1Q96PZ7 3565 aa9.36□□□□□ -0.91
PPP4R1-220ENST00000581835 DCHS2Q6V1P9 2916 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 KIAA1549Q9HCM3 1950 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 MED12LQ86YW9 2145 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 APCP25054 2843 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 C15orf38-AP3S2A0A0A6YYH1 394 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 GXYLT2A0PJZ3 443 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 B4DXG7 233 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 FADS1O60427 444 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 NKX2-2O95096 273 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 IL33O95760 270 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 HOXD4P09016 255 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 ACP2P11117 423 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 GABRA1P14867 456 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 EVI2BP34910 448 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 PSMD4P55036 377 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 DIO3P55073 304 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 NUP107P57740 925 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 VPS26BQ4G0F5 336 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 NHSL2Q5HYW2 709 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 WIPI1Q5MNZ9 446 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 AGBL2Q5U5Z8 902 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 VASNQ6EMK4 673 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 OR5M10Q6IEU7 315 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 MFSD12Q6NUT3 480 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 ZCCHC12Q6PEW1 402 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 B3GNT6Q6ZMB0 384 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 ACAD11Q709F0 780 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 SZRD1Q7Z422 152 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 CAMKMTQ7Z624 323 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 YRDCQ86U90 279 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 PLCZ1Q86YW0 608 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 LRRC34Q8IZ02 419 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 SLC16A11Q8NCK7 471 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 RAB3IL1Q8TBN0 382 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 OR5P2Q8WZ92 322 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 PIK3R3Q92569 461 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 SLC9A6Q92581 669 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 RND1Q92730 232 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 ARL8AQ96BM9 186 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 FAM120BQ96EK7 910 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 C16orf58Q96GQ5 468 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 MS4A4EQ96PG1 132 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 TTYH2Q9BSA4 534 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 DUSP26Q9BV47 211 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 RTN4RQ9BZR6 473 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 BHLHE41Q9C0J9 482 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 CHST11Q9NPF2 352 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 SERHLQ9NQF3 203 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 ZCCHC3Q9NUD5 404 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 ALKBH4Q9NXW9 302 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 NKIRAS1Q9NYS0 192 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 COQ3Q9NZJ6 369 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 FLRT3Q9NZU0 649 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 FBXL2Q9UKC9 423 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 MRTO4Q9UKD2 239 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 RNF6Q9Y252 685 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 SLC6A5Q9Y345 797 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 CREBBPQ92793 2442 aa9.35□□□□□ -0.91
PPP4R1-220ENST00000581835 C17orf51A8MQB3 221 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 AHRRA9YTQ3 701 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 KCNH1O95259 989 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 C6orf47O95873 294 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 IGKV1D-16P01601 117 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 HMGN2P05204 90 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 GLI4P10075 376 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 BMP7P18075 431 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 LBPP18428 481 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 RFX3P48380 749 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 CCT3P49368 545 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 PRIM2P49643 509 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 PRR5P85299 388 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 OCRLQ01968 901 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 DUSP5Q16690 384 aa9.34□□□□□ -0.91
PPP4R1-220ENST00000581835 LSM12Q3MHD2 195 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms