RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 PSMD4P55036 377 aaKnown RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 PER3P56645 1201 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 RPP38P78345 283 aaKnown RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 MRPS22P82650 360 aaKnown RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 MAPRE2Q15555 327 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 SPDYE7PQ495Y7 208 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 TIGD2Q4W5G0 525 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 AGKQ53H12 422 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 TBCELQ5QJ74 424 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 LRIF1Q5T3J3 769 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 C1QTNF12Q5T7M4 302 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 SAXO2Q658L1 398 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 NPSR1Q6W5P4 371 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 C16orf47Q6ZP98 133 aaPredicted RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 MAMDC2Q7Z304 686 aaPredicted RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 NUP54Q7Z3B4 507 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 GALNTL5Q7Z4T8 443 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 DPP10Q8N608 796 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 PAQR8Q8TEZ7 354 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 GTF2H4Q92759 462 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 TMEM125Q96AQ2 219 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 NEURL3Q96EH8 262 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 ELAC2Q9BQ52 826 aaKnown RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 PIGUQ9H490 435 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 LIN28AQ9H9Z2 209 aaKnown RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 TIMMDC1Q9NPL8 285 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 SAR1AQ9NR31 198 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 CNIH4Q9P003 139 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 MRTO4Q9UKD2 239 aaKnown RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 KLF13Q9Y2Y9 288 aaPredicted RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 PCDHGB3Q9Y5G1 929 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 SVILO95425 2214 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 DOPEY1Q5JWR5 2465 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 A0A096LPI6 279 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 RNF103-CHMP3A0A140T963 221 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 BBIP1A8MTZ0 92 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 C9JVG2 144 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 NR5A2O00482 541 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 NME2P1O60361 137 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 TSPAN2O60636 221 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 KCNH1O95259 989 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 CPSF4O95639 269 aaKnown RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 CLDN1O95832 211 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 FAM107AO95990 144 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 AK1P00568 194 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 NPPAP01160 153 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 ABCB1P08183 1280 aaPredicted RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 GUSBP08236 651 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 SNRPB2P08579 225 aaKnown RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 ALOX5P09917 674 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 HOXB9P17482 250 aaPredicted RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 CAPN3P20807 821 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 NME2P22392 152 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 PIGAP37287 484 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 MAN2A2P49641 1150 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 ANXA11P50995 505 aaKnown RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 PRKAG1P54619 331 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 ALDH6A1Q02252 535 aaKnown RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 PLCXD2Q0VAA5 305 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 SNTA1Q13424 505 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 GAB1Q13480 694 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 TP53BP2Q13625 1128 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 EFR3AQ14156 821 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 LASP1Q14847 261 aaKnown RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 SNCBQ16143 134 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 DECR1Q16698 335 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 C1QL3Q5VWW1 255 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 IL20RBQ6UXL0 311 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 C6orf120Q7Z4R8 191 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 FJX1Q86VR8 437 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 ANKRD46Q86W74 232 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 SLC44A2Q8IWA5 706 aaPredicted RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 FBXW8Q8N3Y1 598 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 ANKS4BQ8N8V4 417 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 POGLUT1Q8NBL1 392 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 FAM98AQ8NCA5 519 aaKnown RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 PSD4Q8NDX1 1056 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 FAM110BQ8TC76 370 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 ZFP90Q8TF47 636 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 RNF138Q8WVD3 245 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 OIT3Q8WWZ8 545 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 DIO2Q92813 273 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 RELTQ969Z4 430 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 VPS33AQ96AX1 596 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 NTNG2Q96CW9 530 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 OMA1Q96E52 524 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 MAGED4Q96JG8 741 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 SLC35G5Q96KT7 338 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 SLC35A5Q9BS91 424 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 NMUR2Q9GZQ4 415 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 LEF1Q9UJU2 399 aaPredicted RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 CBLCQ9ULV8 474 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 FAF1Q9UNN5 650 aaPredicted RBP9.08□□□□□ -0.96
GGA3-209ENST00000580646 NDUFAF1Q9Y375 327 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 OR10H1Q9Y4A9 318 aa9.08□□□□□ -0.96
GGA3-209ENST00000580646 UTP20O75691 2785 aaKnown RBP9.07□□□□□ -0.96
GGA3-209ENST00000580646 TRBV5-3A0A0A0MS03 114 aa9.07□□□□□ -0.96
GGA3-209ENST00000580646 TRGV8A0A0C4DH27 118 aa9.07□□□□□ -0.96
GGA3-209ENST00000580646 KLRC4-KLRK1H3BQV0 150 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms