RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 MYBPHQ13203 477 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 SNTA1Q13424 505 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 NSUN5P2Q63ZY6 315 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 APOOLQ6UXV4 268 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 ZAR1Q86SH2 424 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 MARCH3Q86UD3 253 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.79□□□□□ -0.68
LITAF-219ENST00000576334 C16orf58Q96GQ5 468 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 SH3GL2Q99962 352 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 KLHDC3Q9BQ90 382 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 YIPF4Q9BSR8 244 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 REEP4Q9H6H4 257 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 RYDENQ9NUL5 291 aaKnown RBP10.79□□□□□ -0.68
LITAF-219ENST00000576334 FBXO34Q9NWN3 711 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 SH3BP4Q9P0V3 963 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 ZDHHC2Q9UIJ5 367 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 CBLCQ9ULV8 474 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 TRAF6Q9Y4K3 522 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 MED12LQ86YW9 2145 aa10.79□□□□□ -0.68
LITAF-219ENST00000576334 SPG11Q96JI7 2443 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 HIVEP1P15822 2718 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 WDR91A4D1P6 747 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 HSPB2A8KAH6 182 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 SHISA8B8ZZ34 492 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 H3BQF6 201 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 PDPK1O15530 556 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 ITM2AO43736 263 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 TYROBPO43914 113 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 NPHS1O60500 1241 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 COQ9O75208 318 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 SKAP2O75563 359 aaPredicted RBP10.78□□□□□ -0.68
LITAF-219ENST00000576334 BCKDHAP12694 445 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 GABRA3P34903 492 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 TIMP3P35625 211 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 LHX2P50458 406 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 B3GALT5-AS1P59052 145 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 NAA20P61599 178 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 EFR3AQ14156 821 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 HSPB2Q16082 182 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 SLC25A35Q3KQZ1 300 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 ARSKQ6UWY0 536 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 IKBIPQ70UQ0 350 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 SZRD1Q7Z422 152 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 TMEM200AQ86VY9 491 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 IFNEQ86WN2 208 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 LACC1Q8IV20 430 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 PM20D2Q8IYS1 436 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 GCNT2Q8N0V5 402 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 OR2M3Q8NG83 312 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 OR7A2PQ8NGA2 310 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 CAVIN3Q969G5 261 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 PPCDCQ96CD2 204 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 GIMAP5Q96F15 307 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 RMND5BQ96G75 393 aaPredicted RBP10.78□□□□□ -0.68
LITAF-219ENST00000576334 NPAS1Q99742 590 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 CCT7Q99832 543 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 ZNF559Q9BR84 538 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 C1orf50Q9BV19 199 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 PARD6BQ9BYG5 372 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 STMN4Q9H169 189 aaPredicted RBP10.78□□□□□ -0.68
LITAF-219ENST00000576334 LIME1Q9H400 295 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 MID2Q9UJV3 735 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 DKKL1Q9UK85 242 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 MAP1AP78559 2803 aaPredicted RBP10.78□□□□□ -0.68
LITAF-219ENST00000576334 MPDZO75970 2070 aa10.78□□□□□ -0.68
LITAF-219ENST00000576334 NUP214P35658 2090 aaPredicted RBP10.77□□□□□ -0.69
LITAF-219ENST00000576334 MBD3L4A6NDZ8 208 aaPredicted RBP10.77□□□□□ -0.69
LITAF-219ENST00000576334 MBD3L3A6NE82 208 aaPredicted RBP10.77□□□□□ -0.69
LITAF-219ENST00000576334 MBD3L5A6NJ08 208 aaPredicted RBP10.77□□□□□ -0.69
LITAF-219ENST00000576334 CD8B2A6NJW9 211 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 CLCA1A8K7I4 914 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 H0Y3Z8 333 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 ABCB7O75027 752 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 ACTL6AO96019 429 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 IL2RAP01589 272 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 BPGMP07738 259 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 FGF4P08620 206 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 ACP2P11117 423 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 CPN1P15169 458 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 DPP4P27487 766 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 SRD5A2P31213 254 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 GPC1P35052 558 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 ETV4P43268 484 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 RNF144AP50876 292 aaPredicted RBP10.77□□□□□ -0.69
LITAF-219ENST00000576334 DGKQP52824 942 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 CLDN15P56746 228 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 CLDN18P56856 261 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 PDE7AQ13946 482 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 PTGR1Q14914 329 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 GRAMD1BQ3KR37 738 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 WDR93Q6P2C0 686 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 FIGNL1Q6PIW4 674 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 CDH24Q86UP0 819 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 UBQLNLQ8IYU4 475 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 CLYBLQ8N0X4 340 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 RIBC1Q8N443 379 aaPredicted RBP10.77□□□□□ -0.69
LITAF-219ENST00000576334 KRTCAP2Q8N6L1 136 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 FADS6Q8N9I5 356 aa10.77□□□□□ -0.69
LITAF-219ENST00000576334 GATSQ8NAP1 163 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms