RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TYW3Q6IPR3 259 aaKnown RBP22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 ZAR1Q86SH2 424 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 BCORP1Q8N888 145 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 M1APQ8TC57 530 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 NAF1Q96HR8 494 aaKnown RBP22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 COL21A1Q96P44 957 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 CALML5Q9NZT1 146 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 A0A0G2JPF8 293 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 HNRNPCL2B2RXH8 293 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 HNRNPCL3B7ZW38 293 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 STX11O75558 287 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 ZFAND5O76080 213 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 HNRNPCL4P0DMR1 293 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 GCKP35557 465 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 ID4P47928 161 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 PRAMEF8Q5VWM4 474 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 PRAMEF7Q5VXH5 474 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 PRR22Q8IZ63 422 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 FAM110BQ8TC76 370 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 NRG4Q8WWG1 115 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 ZG16BQ96DA0 208 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 ZNF607Q96SK3 696 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 MMP25Q9NPA2 562 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 DSPPQ9NZW4 1301 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 DHRS12A0PJE2 317 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 TMEM200CA6NKL6 621 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 PEX12O00623 359 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 PRKD3O94806 890 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 KRT73Q86Y46 540 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 ADGRG5Q8IZF4 528 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 EID3Q8N140 333 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 SMYD1Q8NB12 490 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 C17orf47Q8NEP4 570 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 OR8K3Q8NH51 312 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 NUBPLQ8TB37 319 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 CANT1Q8WVQ1 401 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 TMBIM1Q969X1 311 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 VPS50Q96JG6 964 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 DEFB126Q9BYW3 111 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 MSRB2Q9Y3D2 182 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 GPC6Q9Y625 555 aaPredicted RBP22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 FREM2Q5SZK8 3169 aa22.21■■□□□ 1.15
ATPAF1-213ENST00000574428 PDE9AO76083 593 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 Q0VFX4 171 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 GPR68Q15743 365 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 CYP27C1Q4G0S4 372 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 ATP1A1-AS1Q5TC04 95 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 CBLL1Q75N03 491 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 OR5L2Q8NGL0 311 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 EFHD2Q96C19 240 aaPredicted RBP22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 TPD52L3Q96J77 140 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 SEPHS2Q99611 448 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 OLAHQ9NV23 265 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 ADPRHL2Q9NX46 363 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 RPS6KA6Q9UK32 745 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 SAMD4AQ9UPU9 718 aaKnown RBP22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 AURKCQ9UQB9 309 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 C15orf41Q9Y2V0 281 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 NPIPA5A0A0B4J1W7 369 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 NPIPA7E9PJI5 369 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 WWP2O00308 870 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 MFN2O95140 757 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 NPIPA8P0DM63 369 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 ETS2P15036 469 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 PSMA4P25789 261 aaKnown RBP22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 DECR1Q16698 335 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 WLSQ5T9L3 541 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 EIF3MQ7L2H7 374 aaKnown RBP22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 VTCN1Q7Z7D3 282 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 ARMC8Q8IUR7 673 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 SLCO4A1Q96BD0 722 aa22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 RSPO3Q9BXY4 272 aaPredicted RBP22.2■■□□□ 1.14
ATPAF1-213ENST00000574428 TMEM229AB2RXF0 380 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 H3BNX3 289 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 TO15178 435 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 KIAA0513O60268 411 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 BAG2O95816 211 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 IFNA14P01570 189 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 ATP6V1C1P21283 382 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 FLYWCH1Q4VC44 716 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 TCTN3Q6NUS6 607 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 ZNF619Q8N2I2 560 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 TP53INP1Q96A56 240 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 HSH2DQ96JZ2 352 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 G6PC3Q9BUM1 346 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 EFHD1Q9BUP0 239 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 SEC14L3Q9UDX4 400 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 ANAPC2Q9UJX6 822 aa22.19■■□□□ 1.14
ATPAF1-213ENST00000574428 ASPMQ8IZT6 3477 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 CENPVL1A0A0U1RR11 272 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 ACOX3O15254 700 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 SUV39H1O43463 412 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 SERPINB7O75635 380 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 ALPPP05187 535 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 GPIP06744 558 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 ITGAMP11215 1152 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 WT1P19544 449 aaPredicted RBP22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 PLCXD2Q0VAA5 305 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 FGF11Q92914 225 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 HSPBAP1Q96EW2 488 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms