RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CALHM3Q86XJ0 350 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 BEST3Q8N1M1 668 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 OR10A6Q8NH74 314 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 TMBIM1Q969X1 311 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 RMND5BQ96G75 393 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-212ENST00000569575 CNTNAP3BQ96NU0 1288 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 BTBD10Q9BSF8 475 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 CNTNAP3Q9BZ76 1288 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 MMADHCQ9H3L0 296 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-212ENST00000569575 IKZF5Q9H5V7 419 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 MTHFD2LQ9H903 347 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-212ENST00000569575 BCL2L10Q9HD36 194 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 CNIH4Q9P003 139 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 PCDHGB6Q9Y5F9 930 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 A0A0G2JPF8 293 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 OR5H15A6NDH6 313 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 HNRNPCL2B2RXH8 293 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 HNRNPCL3B7ZW38 293 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 GYG2O15488 501 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 HNRNPCL4P0DMR1 293 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 ARAFP10398 606 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 SLC7A2P52569 658 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 SNTA1Q13424 505 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 TBCELQ5QJ74 424 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 DEFB107AQ8IZN7 70 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 ZADH2Q8N4Q0 377 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 SLC38A5Q8WUX1 472 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 PIK3R3Q92569 461 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 RAB8BQ92930 207 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 WBP1Q96G27 269 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 ARHGAP9Q9BRR9 750 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 ZNF350Q9GZX5 532 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 CMTM6Q9NX76 183 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 ABCG2Q9UNQ0 655 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 PCDHGA10Q9Y5H3 936 aa21.61■■□□□ 1.05
RAB40C-212ENST00000569575 ANKRD33BA6NCL7 494 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 FAM220BPB1ANY3 271 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 C5orf58C9J3I9 102 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 HSD17B1P14061 328 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 SOX3P41225 446 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 CLK3P49761 638 aaKnown RBP21.6■■□□□ 1.05
RAB40C-212ENST00000569575 GZMMP51124 257 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 SLC25A3Q00325 362 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 CDK6Q00534 326 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 ZSWIM7Q19AV6 140 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 FCRLBQ6BAA4 426 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 REEP3Q6NUK4 255 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 BNC2Q6ZN30 1099 aaPredicted RBP21.6■■□□□ 1.05
RAB40C-212ENST00000569575 WDR53Q7Z5U6 358 aaPredicted RBP21.6■■□□□ 1.05
RAB40C-212ENST00000569575 ZNF527Q8NB42 609 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 HIPK4Q8NE63 616 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 OR2T12Q8NG77 320 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 ZNF583Q96ND8 569 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 ALG2Q9H553 416 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 LIN28AQ9H9Z2 209 aaKnown RBP21.6■■□□□ 1.05
RAB40C-212ENST00000569575 TIMMDC1Q9NPL8 285 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 UBQLN4Q9NRR5 601 aa21.6■■□□□ 1.05
RAB40C-212ENST00000569575 SUCOQ9UBS9 1254 aaKnown RBP21.6■■□□□ 1.05
RAB40C-212ENST00000569575 GXYLT2A0PJZ3 443 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 NME6O75414 186 aaPredicted RBP21.59■■□□□ 1.05
RAB40C-212ENST00000569575 PDE9AO76083 593 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 ETS2P15036 469 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 TUBA3CQ13748 450 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 SELPLGQ14242 412 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 ADRM1Q16186 407 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 NNATQ16517 81 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 VMACQ2NL98 169 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 GPAT3Q53EU6 434 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 LACTB2Q53H82 288 aaPredicted RBP21.59■■□□□ 1.05
RAB40C-212ENST00000569575 TUBA3EQ6PEY2 450 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 LINC00696Q6ZRV3 163 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 RINLQ6ZS11 566 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 CYP4Z2PQ8N1L4 340 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 OR4N2Q8NGD1 307 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 BBS10Q8TAM1 723 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 FBXO30Q8TB52 745 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 EXTL1Q92935 676 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 SLC7A6OSQ96CW6 309 aaPredicted RBP21.59■■□□□ 1.05
RAB40C-212ENST00000569575 CDRT15Q96T59 188 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 SPATA5L1Q9BVQ7 753 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 ADA2Q9NZK5 511 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 LRFN1Q9P244 771 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 PRDM4Q9UKN5 801 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 ANGPT4Q9Y264 503 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 WDR45Q9Y484 360 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 KCNE3Q9Y6H6 103 aa21.59■■□□□ 1.05
RAB40C-212ENST00000569575 ELOVL7A1L3X0 281 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 NME4O00746 187 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 SLC28A2O43868 658 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 DPM1O60762 260 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 WDPCPO95876 746 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 TBXA2RP21731 343 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 PCGF2P35227 344 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 CD96P40200 585 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 ARG2P78540 354 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 OC90Q02509 493 aaPredicted RBP21.58■■□□□ 1.05
RAB40C-212ENST00000569575 LIPEQ05469 1076 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 KCNAB2Q13303 367 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 ST3GAL2Q16842 350 aa21.58■■□□□ 1.05
RAB40C-212ENST00000569575 SLC22A10Q63ZE4 541 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms