RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 KLHL21Q9UJP4 597 aa7.36□□□□□ -1.23
LINC00559-201ENST00000569476 PCDHGB2Q9Y5G2 931 aa7.36□□□□□ -1.23
LINC00559-201ENST00000569476 HEMK1Q9Y5R4 338 aaPredicted RBP7.36□□□□□ -1.23
LINC00559-201ENST00000569476 A0A087WUU8 490 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 UNC119BA6NIH7 251 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 TMX2-CTNND1H3BSU7 103 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ERAL1O75616 437 aaKnown RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 APOA1P02647 267 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 NID1P14543 1247 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 MC3RP41968 323 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 CRYBB2P43320 205 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 MAGEA10P43363 369 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 RANBP1P43487 201 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 DGKEP52429 567 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 RPS26P62854 115 aaKnown RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ATP1A4Q13733 1029 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SSX1Q16384 188 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ALG11Q2TAA5 492 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 AADACL4Q5VUY2 407 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ZNF836Q6ZNA1 936 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 LYSMD2Q8IV50 215 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 CCDC116Q8IYX3 515 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 CA13Q8N1Q1 262 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 KLHL36Q8N4N3 616 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 DNAJC5GQ8N7S2 189 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 AMER3Q8N944 861 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 GDPD1Q8N9F7 314 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 OR6C4Q8NGE1 309 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 OR9A2Q8NGT5 310 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 VANGL1Q8TAA9 524 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 CD180Q99467 661 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 MCOLN1Q9GZU1 580 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 POMT2Q9UKY4 750 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 MRPS33Q9Y291 106 aaKnown RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 WDR45Q9Y484 360 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SLC30A4O14863 429 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SURF4O15260 269 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 AKAP8O43823 692 aaKnown RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 PRKYO43930 277 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 HNRNPCP07910 306 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 NDUFV2P19404 249 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SLC9A3P48764 834 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 RNF144AP50876 292 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 PSMD7P51665 324 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 LBX1P52954 281 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 EPHA4P54764 986 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SNAPC1Q16533 368 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SYT16Q17RD7 645 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ZNF550Q7Z398 422 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 GDF7Q7Z4P5 450 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 LAPTM4BQ86VI4 370 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 CDK20Q8IZL9 346 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 C2orf73Q8N5S3 287 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 OR2T33Q8NG76 320 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 OR52L1Q8NGH7 329 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ABTB1Q969K4 478 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 KCTD12Q96CX2 325 aaKnown RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 MCHR1Q99705 422 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ARHGAP9Q9BRR9 750 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 NDEL1Q9GZM8 345 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 C12orf10Q9HB07 376 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ZNF223Q9UK11 482 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 M0R3H8 397 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ZNF217O75362 1048 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SEMA4FO95754 770 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 BMP8BP34820 402 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ACTR1BP42025 376 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ACTR1AP61163 376 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ACTC1P68032 377 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ACTA1P68133 377 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 POU6F2P78424 691 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 ZNF141Q15928 474 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 C18orf63Q68DL7 685 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 Q6ZPB1 254 aaPredicted RBP7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SPRED2Q7Z698 418 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 TCEANCQ8N8B7 351 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 TEX19Q8NA77 164 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 OR7G1Q8NGA0 311 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 UBE2FQ969M7 185 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SLC25A46Q96AG3 418 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 RNFT2Q96EX2 444 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SDF2Q99470 211 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SLC30A2Q9BRI3 323 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 SLC19A3Q9BZV2 496 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 HOXD1Q9GZZ0 328 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 DOCK8Q8NF50 2099 aa7.35□□□□□ -1.23
LINC00559-201ENST00000569476 OR5K3A6NET4 321 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 CYR61O00622 381 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 LYPD3O95274 346 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 DRD5P21918 477 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 MTNR1AP48039 350 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 SEC13P55735 322 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 PPP3R1P63098 170 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 FOXK2Q01167 660 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 CHRNEQ04844 493 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 MRPL28Q13084 256 aaKnown RBP7.34□□□□□ -1.23
LINC00559-201ENST00000569476 MED22Q15528 200 aa7.34□□□□□ -1.23
LINC00559-201ENST00000569476 ZNHIT3Q15649 155 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms