RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ACSF3Q4G176 576 aaPredicted RBP18.47■□□□□ 0.55
CLK3-225ENST00000569063 SEM1Q6ZVN7 128 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 GDF7Q7Z4P5 450 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 WDR53Q7Z5U6 358 aaPredicted RBP18.47■□□□□ 0.55
CLK3-225ENST00000569063 CEP70Q8NHQ1 597 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 DTNBP1Q96EV8 351 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 WDYHV1Q96HA8 205 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 ABCG2Q9UNQ0 655 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 FADS1O60427 444 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 SNUPNO95149 360 aaKnown RBP18.46■□□□□ 0.55
CLK3-225ENST00000569063 IGFBP2P18065 325 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 MSX1P28360 303 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 SRD5A2P31213 254 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 GABRA3P34903 492 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 GCKP35557 465 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 HPCAL1P37235 193 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 PSMD4P55036 377 aaKnown RBP18.46■□□□□ 0.55
CLK3-225ENST00000569063 ABCE1P61221 599 aaKnown RBP18.46■□□□□ 0.55
CLK3-225ENST00000569063 MPP2Q14168 576 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 DCST1Q5T197 706 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 IL23RQ5VWK5 629 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 ZNF295-AS1Q8N0V1 137 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 CDRT4Q8N9R6 151 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 FNDC5Q8NAU1 212 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 OR14L1PQ8NHC6 308 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 TUBGCP3Q96CW5 907 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 GIMAP5Q96F15 307 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 C3orf14Q9HBI5 128 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 NPDC1Q9NQX5 325 aaPredicted RBP18.46■□□□□ 0.55
CLK3-225ENST00000569063 FBXL2Q9UKC9 423 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.46■□□□□ 0.55
CLK3-225ENST00000569063 CACNA1CQ13936 2221 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 FREM3P0C091 2139 aa18.46■□□□□ 0.55
CLK3-225ENST00000569063 HSPB2A8KAH6 182 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 MYZAPP0CAP1 466 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 CPN1P15169 458 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 TIMP3P35625 211 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 PTGR1Q14914 329 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 HSPB2Q16082 182 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 VPS26BQ4G0F5 336 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 NSUN5P2Q63ZY6 315 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 LACC1Q8IV20 430 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 LIX1LQ8IVB5 337 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 NUP43Q8NFH3 380 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 OR7A2PQ8NGA2 310 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 MS4A4EQ96PG1 132 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 C1orf50Q9BV19 199 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 C20orf27Q9GZN8 174 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 ZNF395Q9H8N7 513 aaPredicted RBP18.45■□□□□ 0.54
CLK3-225ENST00000569063 EQTNQ9NQ60 294 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 FAM120CQ9NX05 1096 aaKnown RBP18.45■□□□□ 0.54
CLK3-225ENST00000569063 TAS2R10Q9NYW0 307 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 CAMK2AQ9UQM7 478 aa18.45■□□□□ 0.54
CLK3-225ENST00000569063 B4DXG7 233 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 EMC8O43402 210 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 NKX2-2O95096 273 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 KCNH1O95259 989 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 LAMP1P11279 417 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 PRPS1L1P21108 318 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 CEACAM8P31997 349 aaPredicted RBP18.44■□□□□ 0.54
CLK3-225ENST00000569063 PRKAG1P54619 331 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 GFRA1P56159 465 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 SMU1Q2TAY7 513 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 SLC25A35Q3KQZ1 300 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 CPTPQ5TA50 214 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 OR5M10Q6IEU7 315 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 ZCCHC12Q6PEW1 402 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 MEX3BQ6ZN04 569 aaKnown RBP18.44■□□□□ 0.54
CLK3-225ENST00000569063 IFNEQ86WN2 208 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 NATD1Q8N6N6 113 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 ZNF781Q8N8C0 355 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 FADS6Q8N9I5 356 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 ZPLD1Q8TCW7 415 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 GPR151Q8TDV0 419 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 COQ8BQ96D53 544 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 C14orf79Q96F83 325 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 CALHM2Q9HA72 323 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 KCNK9Q9NPC2 374 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 SDHAF3Q9NRP4 125 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 ATAD3AQ9NVI7 634 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 FLRT3Q9NZU0 649 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 PPP4R1LQ9P1A2 415 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 EIF3LQ9Y262 564 aaKnown RBP18.44■□□□□ 0.54
CLK3-225ENST00000569063 RAP2CQ9Y3L5 183 aa18.44■□□□□ 0.54
CLK3-225ENST00000569063 NOTCH2Q04721 2471 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 A0A1W2PRB8 838 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 GXYLT2A0PJZ3 443 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 CD8B2A6NJW9 211 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 KDM4EB2RXH2 506 aaPredicted RBP18.43■□□□□ 0.54
CLK3-225ENST00000569063 SCO2O43819 266 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 ZIC3O60481 467 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 SSTR2P30874 369 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 SLC1A6P48664 564 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 CLK3P49761 638 aaKnown RBP18.43■□□□□ 0.54
CLK3-225ENST00000569063 C21orf58P58505 322 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 EMX2Q04743 252 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 MAD2L1Q13257 205 aaPredicted RBP18.43■□□□□ 0.54
CLK3-225ENST00000569063 ENPP6Q6UWR7 440 aa18.43■□□□□ 0.54
CLK3-225ENST00000569063 TRIM42Q8IWZ5 723 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms