RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PKD1L1Q8TDX9 2849 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SYCE3A1L190 88 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 GRID2IPA4D2P6 1211 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 MBD3L3A6NE82 208 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 CD8B2A6NJW9 211 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 DEFB108AA8MXU0 73 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 C17orf105B2RV13 164 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 F5H697 171 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 EIF3FO00303 357 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 PHF1O43189 567 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 C1QAP02745 245 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 C8GP07360 202 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SERPINA6P08185 405 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 HIST1H2AGP0C0S8 130 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 TMIGD3P0DMS9 266 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 TNNI3P19429 210 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 HIST1H2ADP20671 130 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SAT1P21673 171 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 GDF1P27539 372 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 CPOXP36551 454 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 CPA2P48052 419 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 NR1H2P55055 460 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 RAB38P57729 211 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 STX4Q12846 297 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SNX1Q13596 522 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 CAPRIN1Q14444 709 aaKnown RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 HLXQ14774 488 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 RBBP5Q15291 538 aaKnown RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 SF3B4Q15427 424 aaKnown RBP eCLIP5.1□□□□□ -1.59
CDH13-211ENST00000568770 SPA17Q15506 151 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 MPEG1Q2M385 716 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 ZNF791Q3KP31 576 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 PIGGQ5H8A4 983 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 DCST1Q5T197 706 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 C10orf62Q5T681 223 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 PRR14LQ5THK1 2151 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 HEPHL1Q6MZM0 1159 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 HIPK1Q86Z02 1210 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 CNGA4Q8IV77 575 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 DENND6AQ8IWF6 608 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.1□□□□□ -1.59
CDH13-211ENST00000568770 ZNF595Q8IYB9 648 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 UBL4BQ8N7F7 174 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 CCDC89Q8N998 374 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 LRRC57Q8N9N7 239 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 C9orf106Q8NAJ2 232 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 TRPV3Q8NET8 790 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 OR10G3Q8NGC4 313 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 OR14A16Q8NHC5 309 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 MBD3L2Q8NHZ7 208 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 SLC2A12Q8TD20 617 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 PAQR8Q8TEZ7 354 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SLC44A1Q8WWI5 657 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SLC5A11Q8WWX8 675 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SPACA9Q96E40 222 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 PIK3IP1Q96FE7 263 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 RUNDC3BQ96NL0 473 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 WFIKKN1Q96NZ8 548 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 CSF3RQ99062 836 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 H2AFJQ9BTM1 129 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 NPLQ9BXD5 320 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 AMBRA1Q9C0C7 1298 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 MS4A7Q9GZW8 240 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 CCDC68Q9H2F9 335 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 CALHM2Q9HA72 323 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 EIF2B3Q9NR50 452 aaKnown RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 ARL15Q9NXU5 204 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 PAK5Q9P286 719 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 COPS7AQ9UBW8 275 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 NDRG3Q9UGV2 375 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 AMFRQ9UKV5 643 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 MRPS33Q9Y291 106 aaKnown RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 SLC6A5Q9Y345 797 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 SNX13Q9Y5W8 968 aa5.1□□□□□ -1.59
CDH13-211ENST00000568770 CHCHD2Q9Y6H1 151 aaPredicted RBP5.1□□□□□ -1.59
CDH13-211ENST00000568770 PCNX3Q9H6A9 2034 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 TRGV11A0A075B6L2 103 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 A0A087X1B8 175 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 LRIT2A6NDA9 550 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 AKR1B15C9JRZ8 316 aaPredicted RBP5.09□□□□□ -1.59
CDH13-211ENST00000568770 AP3B1O00203 1094 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 CYR61O00622 381 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 CTIFO43310 598 aaKnown RBP5.09□□□□□ -1.59
CDH13-211ENST00000568770 ERI3O43414 337 aaKnown RBP5.09□□□□□ -1.59
CDH13-211ENST00000568770 CTNSO60931 367 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 LDB3O75112 727 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 TRIM3O75382 744 aaPredicted RBP5.09□□□□□ -1.59
CDH13-211ENST00000568770 ETHE1O95571 254 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 ACSL3O95573 720 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 GUCA1CO95843 209 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 HPNP05981 417 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 PPP3CBP16298 524 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 MAKP20794 623 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 HNRNPH1P31943 449 aaKnown RBP5.09□□□□□ -1.59
CDH13-211ENST00000568770 SLC1A2P43004 574 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 SLCO1A2P46721 670 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 STXBP1P61764 594 aaKnown RBP5.09□□□□□ -1.59
CDH13-211ENST00000568770 BASP1P80723 227 aaKnown RBP5.09□□□□□ -1.59
CDH13-211ENST00000568770 REEP5Q00765 189 aa5.09□□□□□ -1.59
CDH13-211ENST00000568770 TIAL1Q01085 375 aaKnown RBP eCLIP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms