RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RTN4RQ9BZR6 473 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 RPH3AQ9Y2J0 694 aaPredicted RBP16.6■□□□□ 0.25
USB1-213ENST00000566292 WBP11Q9Y2W2 641 aaKnown RBP16.6■□□□□ 0.25
USB1-213ENST00000566292 TUBAL3A6NHL2 446 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 COPEO14579 308 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 SCO2O43819 266 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 FADS1O60427 444 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 PRPH2P23942 346 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 CHMP24386 653 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 RIPPLY3P57055 190 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 MRPS22P82650 360 aaKnown RBP16.59■□□□□ 0.25
USB1-213ENST00000566292 SLC18A2Q05940 514 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 GAB1Q13480 694 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 DAZAP2Q15038 168 aaPredicted RBP16.59■□□□□ 0.25
USB1-213ENST00000566292 CYP27C1Q4G0S4 372 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 LIPMQ5VYY2 423 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 IKBIPQ70UQ0 350 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 CDC20BQ86Y33 519 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 KIF18BQ86Y91 864 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 C4orf33Q8N1A6 199 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 OR4K17Q8NGC6 315 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 NINJ1Q92982 152 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 WNT2BQ93097 391 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 INTS12Q96CB8 462 aaKnown RBP16.59■□□□□ 0.25
USB1-213ENST00000566292 ZFP3Q96NJ6 502 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 TM9SF2Q99805 663 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 SFXN3Q9BWM7 321 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 DSN1Q9H410 356 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 CCM2LQ9NUG4 571 aaPredicted RBP16.59■□□□□ 0.25
USB1-213ENST00000566292 DDX18Q9NVP1 670 aaKnown RBP16.59■□□□□ 0.25
USB1-213ENST00000566292 PPP4R1LQ9P1A2 415 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 ST6GALNAC2Q9UJ37 374 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 ZFHX3Q15911 3703 aa16.59■□□□□ 0.25
USB1-213ENST00000566292 NPIPB8E9PQR5 432 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 HCRTR2O43614 444 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 SEC22BO75396 215 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 KRT4P19013 534 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 DSCR4P56555 118 aaPredicted RBP16.58■□□□□ 0.24
USB1-213ENST00000566292 SORDQ00796 357 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 PCLAFQ15004 111 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 Q6ZSR9 355 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 ZNF551Q7Z340 670 aaPredicted RBP16.58■□□□□ 0.24
USB1-213ENST00000566292 C10orf107Q8IVU9 208 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 GCNT2Q8N0V5 402 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 OR2M3Q8NG83 312 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 OR2T11Q8NH01 316 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 GFM2Q969S9 779 aaKnown RBP16.58■□□□□ 0.24
USB1-213ENST00000566292 DTNBP1Q96EV8 351 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 METTL2AQ96IZ6 378 aaKnown RBP16.58■□□□□ 0.24
USB1-213ENST00000566292 LMF2Q9BU23 707 aaKnown RBP16.58■□□□□ 0.24
USB1-213ENST00000566292 CXXC4Q9H2H0 198 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 PPCSQ9HAB8 311 aa16.58■□□□□ 0.24
USB1-213ENST00000566292 IL33O95760 270 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 TGM6O95932 706 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 EPXP11678 715 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 DECR1Q16698 335 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 ZNF385BQ569K4 471 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 ANKRD26P1Q6NSI1 321 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 LUZP2Q86TE4 346 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 GRAMD2AQ8IUY3 354 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 RMND5BQ96G75 393 aaPredicted RBP16.57■□□□□ 0.24
USB1-213ENST00000566292 FCRL1Q96LA6 429 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 FOXC2Q99958 501 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 GATA5Q9BWX5 397 aaPredicted RBP16.57■□□□□ 0.24
USB1-213ENST00000566292 RBM24Q9BX46 236 aaKnown RBP16.57■□□□□ 0.24
USB1-213ENST00000566292 TUBB1Q9H4B7 451 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 LRTM1Q9HBL6 345 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 Q9N2J8 555 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 C1orf109Q9NX04 203 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 GALNT8Q9NY28 637 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 MED11Q9P086 117 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 ABCG2Q9UNQ0 655 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 PLEKHA6Q9Y2H5 1048 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 FIS1Q9Y3D6 152 aa16.57■□□□□ 0.24
USB1-213ENST00000566292 GXYLT2A0PJZ3 443 aa16.56■□□□□ 0.24
USB1-213ENST00000566292 SLC28A1O00337 649 aa16.56■□□□□ 0.24
USB1-213ENST00000566292 AZIN1O14977 448 aa16.56■□□□□ 0.24
USB1-213ENST00000566292 IFI6P09912 130 aa16.56■□□□□ 0.24
USB1-213ENST00000566292 CLDN15P56746 228 aa16.56■□□□□ 0.24
USB1-213ENST00000566292 HSPB3Q12988 150 aa16.56■□□□□ 0.24
USB1-213ENST00000566292 STX5Q13190 355 aa16.56■□□□□ 0.24
USB1-213ENST00000566292 BCL2A1Q16548 175 aa16.56■□□□□ 0.24
USB1-213ENST00000566292 GOT1L1Q8NHS2 421 aaPredicted RBP16.56■□□□□ 0.24
USB1-213ENST00000566292 CIDECQ96AQ7 238 aaPredicted RBP16.56■□□□□ 0.24
USB1-213ENST00000566292 FAM120CQ9NX05 1096 aaKnown RBP16.56■□□□□ 0.24
USB1-213ENST00000566292 NF1P21359 2839 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 PDPK1O15530 556 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 RGS14O43566 566 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 TNFSF13O75888 250 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 IGKV1D-16P01601 117 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 SDC1P18827 310 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 HK1P19367 917 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 GABRA3P34903 492 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 MAP3K8P41279 467 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 RFX3P48380 749 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 ZNHIT3Q15649 155 aaPredicted RBP16.55■□□□□ 0.24
USB1-213ENST00000566292 RNF165Q6ZSG1 346 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 MARCH3Q86UD3 253 aa16.55■□□□□ 0.24
USB1-213ENST00000566292 UBQLNLQ8IYU4 475 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms