RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ZNF446Q9NWS9 450 aa4.11□□□□□ -1.75
CNOT1-209ENST00000566240 UTP6Q9NYH9 597 aaKnown RBP4.11□□□□□ -1.75
CNOT1-209ENST00000566240 RNF14Q9UBS8 474 aa4.11□□□□□ -1.75
CNOT1-209ENST00000566240 GRIN2DO15399 1336 aa4.11□□□□□ -1.75
CNOT1-209ENST00000566240 EEA1Q15075 1411 aa4.11□□□□□ -1.75
CNOT1-209ENST00000566240 ATP10DQ9P241 1426 aa4.11□□□□□ -1.75
CNOT1-209ENST00000566240 A8MXK9 166 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 C11orf98E9PRG8 122 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 TM9SF1O15321 606 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 ZSCAN12O43309 604 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 HMMRO75330 724 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 HCKP08631 526 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 TRIM49P0CI25 452 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 TRIM49CP0CI26 452 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 NT5EP21589 574 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 OXTRP30559 389 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 CAPGP40121 348 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 POU3F4P49335 361 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 MFAP2P55001 183 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 MAPK6Q16659 721 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 ACER2Q5QJU3 275 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 SEL1L2Q5TEA6 688 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 SLX4IPQ5VYV7 408 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 FAM219BQ5XKK7 198 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 PYHIN1Q6K0P9 492 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 LRRC70Q7Z2Q7 622 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 PARGQ86W56 976 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 CATSPER3Q86XQ3 398 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 ZNF679Q8IYX0 411 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 NANPQ8TBE9 248 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 CTNNBL1Q8WYA6 563 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-209ENST00000566240 C18orf25Q96B23 403 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-209ENST00000566240 CCT7Q99832 543 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 TTYH2Q9BSA4 534 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 CHCHD5Q9BSY4 110 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 CCDC28BQ9BUN5 200 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 VCX2Q9H322 139 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 LRRC40Q9H9A6 602 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 MLXQ9UH92 298 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 SMC3Q9UQE7 1217 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 GSTK1Q9Y2Q3 226 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 PTCH1Q13635 1447 aa4.1□□□□□ -1.75
CNOT1-209ENST00000566240 ESYT2A0FGR8 921 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 FAM74A7A6NL05 159 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 PPIHO43447 177 aaKnown RBP4.09□□□□□ -1.75
CNOT1-209ENST00000566240 ZG16O60844 167 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 STX11O75558 287 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 PALMO75781 387 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 SNX4O95219 450 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 OPN1LWP04000 364 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 CPN1P15169 458 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 H2AFXP16104 143 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-209ENST00000566240 XRCC1P18887 633 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-209ENST00000566240 HNF1AP20823 631 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 UQCRC2P22695 453 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 MAGEA5P43359 124 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 EMDP50402 254 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 PPT1P50897 306 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 ATP12AP54707 1039 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 RPS6P62753 249 aaKnown RBP4.09□□□□□ -1.75
CNOT1-209ENST00000566240 ACY1Q03154 408 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 ZNF33BQ06732 778 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 HYAL1Q12794 435 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 FAM74A3Q4VXF1 159 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 C2CD6Q53TS8 623 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 TTC23Q5W5X9 447 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 REP15Q6BDI9 236 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 LANCL3Q6ZV70 420 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 CYS1Q717R9 158 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 PRSS48Q7RTY5 328 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 ANKRD37Q7Z713 158 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 SUMF1Q8NBK3 374 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 BEST4Q8NFU0 473 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 TRMT10AQ8TBZ6 339 aaKnown RBP4.09□□□□□ -1.75
CNOT1-209ENST00000566240 MYLPFQ96A32 169 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 C11orf24Q96F05 449 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-209ENST00000566240 WBP1Q96G27 269 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 NAP1L5Q96NT1 182 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-209ENST00000566240 PSKH2Q96QS6 385 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 IWS1Q96ST2 819 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 ATF6BQ99941 703 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 FEM1AQ9BSK4 669 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 TRIM9Q9C026 710 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 TUBB1Q9H4B7 451 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 ELOVL3Q9HB03 270 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 ABCC13Q9NSE7 274 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 TXLNGQ9NUQ3 528 aa4.09□□□□□ -1.75
CNOT1-209ENST00000566240 TRBV7-9A0A0J9YWB2 115 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 RPL37AP8A6NKH3 93 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 CXCL11O14625 94 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 DCXO43602 365 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 SNNO75324 88 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 SEMA4FO95754 770 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 IGKV3-20P01619 116 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 LMO2P25791 158 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 NCAPD3P42695 1498 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 IRX1P78414 480 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 NTHL1P78549 312 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 ABCC8Q09428 1581 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 LRRC74AQ0VAA2 488 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms