RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 H6PDO95479 791 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 HMGN2P05204 90 aaKnown RBP11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ABCB1P08183 1280 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-206ENST00000565990 PSMA4P25789 261 aaKnown RBP11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ITGA3P26006 1051 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 TRHRP34981 398 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-206ENST00000565990 MAGEA8P43361 318 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ALDH3B2P48448 385 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 MAN2A2P49641 1150 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 SLC7A2P52569 658 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 MYBPC1Q00872 1141 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 PSG6Q00889 435 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ST3GAL2Q16842 350 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 AGAP7PQ5VUJ5 663 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 TCTN3Q6NUS6 607 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 BHLHB9Q6PI77 547 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ZNF621Q6ZSS3 439 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 SLC29A4Q7RTT9 530 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 MSRB3Q8IXL7 192 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 SLC5A8Q8N695 610 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 TRIML2Q8N7C3 387 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 CDRT4Q8N9R6 151 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 OR56A1Q8NGH5 318 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ZFP90Q8TF47 636 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 TTC9Q92623 222 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 NEURL3Q96EH8 262 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 C16orf58Q96GQ5 468 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ZNF354BQ96LW1 612 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 AGAP4Q96P64 663 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 MS4A4EQ96PG1 132 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 WWTR1Q9GZV5 400 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 CDCP1Q9H5V8 836 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 TRIM45Q9H8W5 580 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-206ENST00000565990 FOLH1BQ9HBA9 442 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ZCCHC3Q9NUD5 404 aaKnown RBP11.67□□□□□ -0.54
SF3B3-206ENST00000565990 DDX18Q9NVP1 670 aaKnown RBP11.67□□□□□ -0.54
SF3B3-206ENST00000565990 SLC25A37Q9NYZ2 338 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 UBAP1Q9NZ09 502 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 VPS4AQ9UN37 437 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 DTX4Q9Y2E6 619 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 MYRFQ9Y2G1 1151 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 YARS2Q9Y2Z4 477 aaKnown RBP11.67□□□□□ -0.54
SF3B3-206ENST00000565990 ATMQ13315 3056 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 USP24Q9UPU5 2620 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 EXPH5Q8NEV8 1989 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 A6NL46 340 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 H3BNH8 94 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 MAN1A2O60476 641 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 NKX2-2O95096 273 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 NADKO95544 446 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-206ENST00000565990 GSNP06396 782 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 FASP25445 335 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 HTR1EP28566 365 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 MVDP53602 400 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 PSPHP78330 225 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 GAB1Q13480 694 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 MEP1AQ16819 746 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 RUNDC3AQ59EK9 446 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 ACER2Q5QJU3 275 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 SAXO2Q658L1 398 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 B3GNTL1Q67FW5 361 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-206ENST00000565990 LYPD8Q6UX82 237 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 IGFL3Q6UXB1 125 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 ISLR2Q6UXK2 745 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 CLEC4FQ8N1N0 589 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 PNPT1Q8TCS8 783 aaKnown RBP11.66□□□□□ -0.54
SF3B3-206ENST00000565990 HAS2Q92819 552 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 EXTL1Q92935 676 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 SLCO4A1Q96BD0 722 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 HSPBAP1Q96EW2 488 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 CENPNQ96H22 339 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-206ENST00000565990 MAGED4Q96JG8 741 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 LCORQ96JN0 433 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-206ENST00000565990 SLC35A5Q9BS91 424 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 COQ10BQ9H8M1 238 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 LIN28AQ9H9Z2 209 aaKnown RBP11.66□□□□□ -0.54
SF3B3-206ENST00000565990 VAPAQ9P0L0 249 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 TEKT2Q9UIF3 430 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 TUBD1Q9UJT1 453 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 PCDHGB7Q9Y5F8 929 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 SNX13Q9Y5W8 968 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 SNX8Q9Y5X2 465 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 EML6Q6ZMW3 1958 aa11.66□□□□□ -0.54
SF3B3-206ENST00000565990 A0A087WXM4 84 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 DHRS12A0PJE2 317 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 FRG2CA6NGY1 282 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 ACOX3O15254 700 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 ZNF354AO60765 605 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-206ENST00000565990 NME6O75414 186 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-206ENST00000565990 OR2J2O76002 312 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 KCNH1O95259 989 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 C1QCP02747 245 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 NAGAP17050 411 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 GPX2P18283 190 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 MYF6P23409 242 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 PRIM2P49643 509 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 ERFP50548 548 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 PRKAG1P54619 331 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 MFAP5Q13361 173 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 COL28A1Q2UY09 1125 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms