RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SLC12A6Q9UHW9 1150 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SH3BGRL2Q9UJC5 107 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 GGA2Q9UJY4 613 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 VANGL2Q9ULK5 521 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 NEU3Q9UQ49 428 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 R4GN57 208 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 PTPRBP23467 1997 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 CACNA1AO00555 2505 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 PLXNB3Q9ULL4 1909 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 COL5A1P20908 1838 aaPredicted RBP4.31□□□□□ -1.72
LINC00254-201ENST00000563416 A0A087X0T9 212 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CXorf51AA0A1B0GTR3 108 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 A0A1W2PN81 502 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 ANKUB1A6NFN9 424 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 E9PAM4 449 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 E9PI62 339 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 VEGFDO43915 354 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CLDN11O75508 207 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 PGLSO95336 258 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 PIGNO95427 931 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 SLC16A8O95907 504 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 FAM228BP0C875 321 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 GABRG2P18507 467 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 EPORP19235 508 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 SLC6A6P31641 620 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CHRNA7P36544 502 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 WNT5AP41221 380 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CSKP41240 450 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CASP9P55211 416 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CDH4P55283 916 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 HNRNPKP61978 463 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC00254-201ENST00000563416 PNRC1Q12796 327 aaPredicted RBP4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CDH18Q13634 790 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 FCN2Q15485 313 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 HFEQ30201 348 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 ENPP7Q6UWV6 458 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 NHLRC1Q6VVB1 395 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 TMEM182Q6ZP80 229 aaPredicted RBP4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CYP4V2Q6ZWL3 525 aaPredicted RBP4.31□□□□□ -1.72
LINC00254-201ENST00000563416 ASCL5Q7RTU5 278 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 VPS36Q86VN1 386 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 FAM131BQ86XD5 332 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CCDC185Q8N715 623 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 TSTD1Q8NFU3 115 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 OR8K1Q8NGG5 319 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 OR52K2Q8NGK3 314 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 RNF128Q8TEB7 428 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 HSD17B8Q92506 261 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 MOB3AQ96BX8 217 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 RPRD1AQ96P16 312 aaPredicted RBP4.31□□□□□ -1.72
LINC00254-201ENST00000563416 PARVAQ9NVD7 372 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 TAS2R3Q9NYW6 316 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 OR51B4Q9Y5P0 310 aa4.31□□□□□ -1.72
LINC00254-201ENST00000563416 CNOT1A5YKK6 2376 aaKnown RBP4.31□□□□□ -1.72
LINC00254-201ENST00000563416 BPTFQ12830 3046 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 PIKFYVEQ9Y2I7 2098 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 IGKV3D-15A0A087WSY6 115 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 IGHV4-61A0A0C4DH41 118 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 C13orf42A0A1B0GVH6 325 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ILVBLA1L0T0 632 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 SMIM30A4D0T7 59 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 TMCO5BA8MYB1 307 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 C10orf142B7Z368 130 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 WASH3PC4AMC7 463 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 NR5A2O00482 541 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 NOL3O60936 208 aaKnown RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 LRCH4O75427 683 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 PRKRAO75569 313 aaKnown RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 LCA5LO95447 670 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 IGLV3-19P01714 112 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 IGHV4-59P01825 116 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ALPPP05187 535 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 FAM157CP0CG43 387 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 C8orf89P0DMQ9 161 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ALPPL2P10696 532 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 CEACAM1P13688 526 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 POLR2EP19388 210 aaKnown RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 P2RY2P41231 377 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 KCNJ1P48048 391 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 PDX1P52945 283 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ADARP55265 1226 aaKnown RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 NME5P56597 212 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 CX3CL1P78423 397 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 GFPT1Q06210 699 aaPredicted RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 SRSF5Q13243 272 aaKnown RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ZFP69Q49AA0 526 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 AARDQ4LEZ3 155 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 LRRC73Q5JTD7 316 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 FFAR4Q5NUL3 377 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 PRR27Q6MZM9 219 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 DCUN1D2Q6PH85 259 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 FIGLAQ6QHK4 219 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 LRRC31Q6UY01 552 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 SETD3Q86TU7 594 aaPredicted RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 PSTKQ8IV42 348 aaKnown RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 APCDD1Q8J025 514 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 SFRP1Q8N474 314 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms