RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 FAM174BQ3ZCQ3 159 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 CYP27C1Q4G0S4 372 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ANXA8L1Q5VT79 327 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 FNDC7Q5VTL7 733 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 NXNQ6DKJ4 435 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 CLEC18BQ6UXF7 455 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 BNC2Q6ZN30 1099 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 GK5Q6ZS86 529 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ACAD11Q709F0 780 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 WDR53Q7Z5U6 358 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 SLC44A2Q8IWA5 706 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 CHERPQ8IWX8 916 aaKnown RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 CLECL1Q8IZS7 167 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 CLEC18CQ8NCF0 446 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 SLC16A11Q8NCK7 471 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 FAM13CQ8NE31 585 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 SFXN5Q8TD22 340 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 DIO2Q92813 273 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 TMBIM1Q969X1 311 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 MAGED4Q96JG8 741 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 NODALQ96S42 347 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 SIKE1Q9BRV8 207 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ANGPTL4Q9BY76 406 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 TTTY12Q9BZ98 90 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ZDHHC11Q9H8X9 412 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ZCCHC3Q9NUD5 404 aaKnown RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 FAM120CQ9NX05 1096 aaKnown RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 GIN1Q9NXP7 522 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 BTNL2Q9UIR0 455 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 CBLCQ9ULV8 474 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 VPS4AQ9UN37 437 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 EXPH5Q8NEV8 1989 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 PRRC2CQ9Y520 2896 aaKnown RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ANKUB1A6NFN9 424 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 LRRC3CA6NJW4 275 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 G3V3Y1 287 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 SLC22A3O75751 556 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 SNX4O95219 450 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ACP2P11117 423 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 GNLYP22749 145 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 MAN2A2P49641 1150 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 DGKQP52824 942 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 PRKAG1P54619 331 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 NME5P56597 212 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 IRX1P78414 480 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 GUCY1A3Q02108 690 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ALDH6A1Q02252 535 aaKnown RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ZNF155Q12901 538 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 MRPL49Q13405 166 aaKnown RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 SNTA1Q13424 505 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 VPS26BQ4G0F5 336 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 KRTCAP3Q53RY4 240 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 CMPK2Q5EBM0 449 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 PRAMEF20Q5VT98 475 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 BICRALQ6AI39 1079 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ANKRD46Q86W74 232 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 VPS37AQ8NEZ2 397 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 OR56A1Q8NGH5 318 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 OR5M3Q8NGP4 307 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 OR9I1Q8NGQ6 314 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 FAM110BQ8TC76 370 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 MOAP1Q96BY2 351 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 C16orf58Q96GQ5 468 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 MARK4Q96L34 752 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 GPR137Q96N19 417 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 CCDC115Q96NT0 180 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 COL21A1Q96P44 957 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 ADOQ96SZ5 270 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 STACQ99469 402 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 IL1RL2Q9HB29 575 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 Q9N2J8 555 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 SERHLQ9NQF3 203 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 DUSP22Q9NRW4 184 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 TMEM45AQ9NWC5 275 aa5.67□□□□□ -1.5
CNOT1-204ENST00000563130 TUBA8Q9NY65 449 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-204ENST00000563130 UBR5O95071 2799 aaPredicted RBP5.66□□□□□ -1.5
CNOT1-204ENST00000563130 RP1L1Q8IWN7 2480 aaPredicted RBP5.66□□□□□ -1.5
CNOT1-204ENST00000563130 NUP214P35658 2090 aaPredicted RBP5.66□□□□□ -1.5
CNOT1-204ENST00000563130 C9JVG2 144 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 NPIPA5E9PKD4 350 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 DYNC1I1O14576 645 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 ASNA1O43681 348 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 HS6ST1O60243 411 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 REM1O75628 298 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 SOX30O94993 753 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 IL33O95760 270 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 IL6P05231 212 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 S100A3P33764 101 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 GABRA3P34903 492 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 ADH7P40394 386 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 MDH1P40925 334 aaKnown RBP5.66□□□□□ -1.5
CNOT1-204ENST00000563130 RFC3P40938 356 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 RPP38P78345 283 aaKnown RBP5.66□□□□□ -1.5
CNOT1-204ENST00000563130 SRSF1Q07955 248 aaKnown RBP eCLIP5.66□□□□□ -1.5
CNOT1-204ENST00000563130 LRRC74AQ0VAA2 488 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 LASP1Q14847 261 aaKnown RBP5.66□□□□□ -1.5
CNOT1-204ENST00000563130 ZNHIT3Q15649 155 aaPredicted RBP5.66□□□□□ -1.5
CNOT1-204ENST00000563130 DUSP5Q16690 384 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 ALKBH2Q6NS38 261 aa5.66□□□□□ -1.5
CNOT1-204ENST00000563130 CGB2Q6NT52 195 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms