RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CNEP1R1Q8N9A8 125 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 COQ8AQ8NI60 647 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 H0YAE9 185 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 SMAD9O15198 467 aaKnown RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 PRPS1P60891 318 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 GALNT1Q10472 559 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF404Q494X3 552 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 VTCN1Q7Z7D3 282 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 GATAD2BQ8WXI9 593 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF442Q9H7R0 627 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 RDH8Q9NYR8 311 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 RBMX2Q9Y388 322 aaKnown RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 NAALAD2Q9Y3Q0 740 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 STRCQ7RTU9 1775 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 KIAA0355O15063 1070 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 SNAP29O95721 258 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 CNPY1Q3B7I2 92 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 SYNPOQ8N3V7 929 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 MDGA1Q8NFP4 955 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 PTERQ96BW5 349 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 DDCP20711 480 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 KANK2Q63ZY3 851 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 OR9K2Q8NGE7 335 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 CASTOR1Q8WTX7 329 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 EFCAB7A8K855 629 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 DLGAP1O14490 977 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 GTF2F2P13984 249 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 RAB41Q5JT25 222 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 KDELC1Q6UW63 502 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 C3P1Q6ZMU1 363 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 FEVQ99581 238 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 ENAMQ9NRM1 1142 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 SACM1LQ9NTJ5 587 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 FBXL3Q9UKT7 428 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 GMEB1Q9Y692 573 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 MIA3Q5JRA6 1907 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 ZCWPW2A0A1B0GU75 182 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 LRRN3E7EW58 273 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 PHYHO14832 338 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 HTRA2O43464 458 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-208ENST00000560371 ELK4P28324 431 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 CCR7P32248 378 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 ARSKQ6UWY0 536 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 LRRN3Q9H3W5 708 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 ETAA1Q9NY74 926 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 IL20RAQ9UHF4 553 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF175Q9Y473 711 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 TRPM3Q9HCF6 1732 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-208ENST00000560371 ABOP16442 354 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 MTNR1AP48039 350 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-208ENST00000560371 SNU13P55769 128 aaKnown RBP12.73□□□□□ -0.37
TRAF3-208ENST00000560371 TAP2Q03519 686 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 APOFQ13790 326 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 RSU1Q15404 277 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 GRK1Q15835 563 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 SCML4Q8N228 414 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 MYRFLQ96LU7 910 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 SLC35A3Q9Y2D2 325 aa12.73□□□□□ -0.37
TRAF3-208ENST00000560371 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 HDAC2Q92769 488 aaKnown RBP12.72□□□□□ -0.37
TRAF3-208ENST00000560371 UHRF1Q96T88 793 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-208ENST00000560371 INPP5KQ9BT40 448 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 LCATP04180 440 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 CD46P15529 392 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 APLNRP35414 380 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 SPHARQ15513 63 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF789Q5FWF6 425 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 ZIC5Q96T25 663 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF350Q9GZX5 532 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 NKX1-2Q9UD57 310 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-208ENST00000560371 TRBV11-1A0A0K0K1C0 115 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF850A8MQ14 1090 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 DIRAS3O95661 229 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 PENKP01210 267 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-208ENST00000560371 PVRP15151 417 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 PRLHRP49683 370 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 ATAD3CQ5T2N8 411 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF517Q6ZMY9 492 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-208ENST00000560371 UCKL1Q9NWZ5 548 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 KLHL42Q9P2K6 505 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 COL16A1Q07092 1604 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-208ENST00000560371 FXYD6-FXYD2A0A087WZ82 144 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 MYOGP15173 224 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 AMY2BP19961 511 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
TRAF3-208ENST00000560371 SLC14A2Q15849 920 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 KLBQ86Z14 1044 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 SPPL3Q8TCT6 385 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF471Q9BX82 626 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-208ENST00000560371 FXYD6Q9H0Q3 95 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 KCNN3Q9UGI6 736 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 RIMS3Q9UJD0 308 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 RNF215Q9Y6U7 377 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 FAM189BP81408 668 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 CD83Q01151 205 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 C6orf132Q5T0Z8 1188 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 TCTN2Q96GX1 697 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms