RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SRD5A1P18405 259 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 ATP6V0D1P61421 351 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 POU4F1Q01851 419 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 DUSP2Q05923 314 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 TRMT12Q53H54 448 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 BEND4Q6ZU67 534 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 MYLK4Q86YV6 388 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 CTAGE4Q8IX94 777 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 KBTBD8Q8NFY9 601 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 OR2M3Q8NG83 312 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 UBTD2Q8WUN7 234 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 S100PBPQ96BU1 408 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 TACO1Q9BSH4 297 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 STMN4Q9H169 189 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 L2HGDHQ9H9P8 463 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 OPTCQ9UBM4 332 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 CES1P1Q9UKY3 287 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 PCDHGA11Q9Y5H2 935 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 ELOA3DA6NLF2 546 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 H0YIV9 168 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 SS18L1O75177 396 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 ATP1B1P05026 303 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 CT45A8P0DMV1 189 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 CT45A9P0DMV2 189 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 IGHV4-31P0DP07 118 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 ZNF16P17020 682 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 IGFBP5P24593 272 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 FEN1P39748 380 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 MAGEA4P43358 317 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 SLC12A2P55011 1212 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 CTBP2P56545 445 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 RPS3AP61247 264 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 CAV1Q03135 178 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 EFR3AQ14156 821 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 SLMAPQ14BN4 828 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 ELOA3BQ3SY89 546 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 CT45A2Q5DJT8 189 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 LIPJQ5W064 366 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 IL17RELQ6ZVW7 336 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 DTX2Q86UW9 622 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 CCDC25Q86WR0 208 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 ELOA3Q8NG57 546 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 PYROXD1Q8WU10 500 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 GFM2Q969S9 779 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 GMPPAQ96IJ6 420 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 UBXN10Q96LJ8 280 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 BTBD9Q96Q07 612 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 TRIM2Q9C040 744 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 GRIP2Q9C0E4 1043 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 FANCFQ9NPI8 374 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 NINJ2Q9NZG7 142 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 NUDT4Q9NZJ9 180 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 MED11Q9P086 117 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 PPP4R1LQ9P1A2 415 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 PRODH2Q9UF12 536 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 B3GALT5Q9Y2C3 310 aa11.43□□□□□ -0.58
RABGGTA-213ENST00000560127 TRRAPQ9Y4A5 3859 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 UBXN8O00124 270 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 LMX1BO60663 402 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 NME6O75414 186 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 SIX3O95343 332 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 PLGP00747 810 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 PCSK2P16519 638 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 NUDT6P53370 316 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 CORO7P57737 925 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 PHEXP78562 749 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 MRPS35P82673 323 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 GANABQ14697 944 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 TSC22D1Q15714 1073 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 LTB4RQ15722 352 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 TAB1Q15750 504 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 SGCBQ16585 318 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 CPSF6Q16630 551 aaKnown RBP eCLIP11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 NRF1Q16656 503 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 PPP4R4Q6NUP7 873 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 SEZ6L2Q6UXD5 910 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 LARP4Q71RC2 724 aaKnown RBP eCLIP11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 ISCA2Q86U28 154 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 GGNQ86UU5 652 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 TEX9Q8N6V9 391 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 MNS1Q8NEH6 495 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 STEAP2Q8NFT2 490 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 WDR20Q8TBZ3 569 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 ALG2Q9H553 416 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 ALG9Q9H6U8 611 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 ANKRA2Q9H9E1 313 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 FOLH1BQ9HBA9 442 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 ZBTB26Q9HCK0 441 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 PCDHA9Q9Y5H5 950 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 AP4B1Q9Y6B7 739 aa11.42□□□□□ -0.58
RABGGTA-213ENST00000560127 HMX2A2RU54 273 aa11.41□□□□□ -0.58
RABGGTA-213ENST00000560127 DPRXA6NFQ7 191 aa11.41□□□□□ -0.58
RABGGTA-213ENST00000560127 GOLGA6L10A6NI86 522 aa11.41□□□□□ -0.58
RABGGTA-213ENST00000560127 FOXE1O00358 373 aaPredicted RBP11.41□□□□□ -0.58
RABGGTA-213ENST00000560127 UBFD1O14562 309 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-213ENST00000560127 SCO2O43819 266 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms