RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PNLIPRP2P54317 469 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 ACTR3P61158 418 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 RPS26P62854 115 aaKnown RBP11.48□□□□□ -0.57
TPM1-209ENST00000558072 CHAF1BQ13112 559 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 EIPR1Q53HC9 387 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 CT45A2Q5DJT8 189 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 DCAF10Q5QP82 559 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 ERMP1Q7Z2K6 904 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 C9orf40Q8IXQ3 194 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 ARMC10Q8N2F6 343 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 ZNF619Q8N2I2 560 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 ZNF441Q8N8Z8 693 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 NFKBIDQ8NI38 313 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 FAM110BQ8TC76 370 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 RAB8BQ92930 207 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 DTNBP1Q96EV8 351 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 RSRC1Q96IZ7 334 aaKnown RBP11.48□□□□□ -0.57
TPM1-209ENST00000558072 CLPTM1LQ96KA5 538 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 SDF2Q99470 211 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 TREX2Q9BQ50 279 aaPredicted RBP11.48□□□□□ -0.57
TPM1-209ENST00000558072 ZNF350Q9GZX5 532 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 SAP130Q9H0E3 1048 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 PIF1Q9H611 641 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 KLHL28Q9NXS3 571 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 MYOTQ9UBF9 498 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 EGFL7Q9UHF1 273 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 PCDHGA10Q9Y5H3 936 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 WDFY3Q8IZQ1 3526 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 CDC14CA4D256 554 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 OR6C70A6NIJ9 312 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 H3BNH8 94 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 HRKO00198 91 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 TP53I11O14683 189 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 KLK10O43240 276 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 SUV39H1O43463 412 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 FKBP6O75344 327 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 H6PDO95479 791 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 IL33O95760 270 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 ALPPP05187 535 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 C8BP07358 591 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 THBS1P07996 1170 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 PSMA4P25789 261 aaKnown RBP11.47□□□□□ -0.57
TPM1-209ENST00000558072 NR0B1P51843 470 aaKnown RBP11.47□□□□□ -0.57
TPM1-209ENST00000558072 SOX8P57073 446 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 PCBP3P57721 371 aaKnown RBP11.47□□□□□ -0.57
TPM1-209ENST00000558072 CORO7P57737 925 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 PLCXD2Q0VAA5 305 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 DUSP8Q13202 625 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 MEP1AQ16819 746 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 FAM98BQ52LJ0 330 aaKnown RBP11.47□□□□□ -0.57
TPM1-209ENST00000558072 H3F3CQ6NXT2 135 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 NUP54Q7Z3B4 507 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 SPATA24Q86W54 205 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 RPS19BP1Q86WX3 136 aaKnown RBP11.47□□□□□ -0.57
TPM1-209ENST00000558072 ARMC8Q8IUR7 673 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 CMIPQ8IY22 773 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 FAM13CQ8NE31 585 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 TTC9Q92623 222 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 DIO2Q92813 273 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 TMCO6Q96DC7 493 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 RMND5BQ96G75 393 aaPredicted RBP11.47□□□□□ -0.57
TPM1-209ENST00000558072 SECISBP2Q96T21 854 aaKnown RBP11.47□□□□□ -0.57
TPM1-209ENST00000558072 TRIM8Q9BZR9 551 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 LHPPQ9H008 270 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 SERHL2Q9H4I8 314 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 ANKRA2Q9H9E1 313 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 UBQLN4Q9NRR5 601 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 DCAF13Q9NV06 445 aaKnown RBP11.47□□□□□ -0.57
TPM1-209ENST00000558072 SEC14L3Q9UDX4 400 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 RAXQ9Y2V3 346 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 NPFFR2Q9Y5X5 522 aa11.47□□□□□ -0.57
TPM1-209ENST00000558072 TMEM8BA6NDV4 472 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 M0QX08 132 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 TAF4O00268 1085 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 SCDO00767 359 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 KIAA0513O60268 411 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 NME6O75414 186 aaPredicted RBP11.46□□□□□ -0.57
TPM1-209ENST00000558072 REM1O75628 298 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 CAPNS1P04632 268 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 NGFRP08138 427 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 CELA2AP08217 269 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 NUDT7P0C024 238 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 PRKAR1AP10644 381 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 IL7RP16871 459 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 ITGA2P17301 1181 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 PRKAR1BP31321 381 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 IFNA8P32881 189 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 EIF2S3P41091 472 aaKnown RBP11.46□□□□□ -0.57
TPM1-209ENST00000558072 CASRP41180 1078 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 SSR4P51571 173 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 ATP12AP54707 1039 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 CASP9P55211 416 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 SELENOWP63302 87 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 RHDQ02161 417 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 CHRNB3Q05901 458 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 ATP1A4Q13733 1029 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 SYPL1Q16563 259 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 FLYWCH1Q4VC44 716 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 LIN52Q52LA3 116 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 LRRC23Q53EV4 343 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms