RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ARHGAP22Q7Z5H3 698 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 TSPYL5Q86VY4 417 aaPredicted RBP6.86□□□□□ -1.31
SPG11-204ENST00000557866 KMT5CQ86Y97 462 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ZNF595Q8IYB9 648 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 OR52R1Q8NGF1 315 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 CEP76Q8TAP6 659 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 SLC9A6Q92581 669 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 CDS1Q92903 461 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ZNF501Q96CX3 271 aaPredicted RBP6.86□□□□□ -1.31
SPG11-204ENST00000557866 RNF31Q96EP0 1072 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 DHRS1Q96LJ7 313 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ZNF354BQ96LW1 612 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 MS4A4EQ96PG1 132 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 TRNT1Q96Q11 434 aaKnown RBP6.86□□□□□ -1.31
SPG11-204ENST00000557866 ZNF347Q96SE7 839 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ZNF607Q96SK3 696 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 EPYCQ99645 322 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 PIP5K1AQ99755 562 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ALOXE3Q9BYJ1 711 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 LRRN3Q9H3W5 708 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ZNF696Q9H7X3 374 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 REEP1Q9H902 201 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 CXorf21Q9HAI6 301 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ADAP2Q9NPF8 381 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 NECTIN3Q9NQS3 549 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 PRTFDC1Q9NRG1 225 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 LANCL2Q9NS86 450 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ACER3Q9NUN7 267 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 EXD2Q9NVH0 621 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 FAM118AQ9NWS6 357 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 PDP1Q9P0J1 537 aaPredicted RBP6.86□□□□□ -1.31
SPG11-204ENST00000557866 IFT80Q9P2H3 777 aaPredicted RBP6.86□□□□□ -1.31
SPG11-204ENST00000557866 DHCR7Q9UBM7 475 aaKnown RBP6.86□□□□□ -1.31
SPG11-204ENST00000557866 KCND3Q9UK17 655 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 BAG5Q9UL15 447 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 LIPT1Q9Y234 373 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 SH3GLB1Q9Y371 365 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 PCDHGB3Q9Y5G1 929 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 LYVE1Q9Y5Y7 322 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 THADAQ6YHU6 1953 aa6.86□□□□□ -1.31
SPG11-204ENST00000557866 ARID1BQ8NFD5 2236 aaPredicted RBP6.85□□□□□ -1.31
SPG11-204ENST00000557866 CABIN1Q9Y6J0 2220 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SCN3AQ9NY46 2000 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 IGHV5-10-1A0A0J9YXX1 117 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 GXYLT2A0PJZ3 443 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 DPPA5A6NC42 116 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 TMEM247A6NEH6 219 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 A8MVJ9 347 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 M0R3H8 397 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 PCDH17O14917 1159 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 ADAMDEC1O15204 470 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 OR10H2O60403 315 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SERPINB7O75635 380 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SLITRK5O94991 958 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 CLPSP04118 112 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 RPLP0P05388 317 aaKnown RBP6.85□□□□□ -1.31
SPG11-204ENST00000557866 GSTP1P09211 210 aaKnown RBP6.85□□□□□ -1.31
SPG11-204ENST00000557866 ANKRD34CP0C6C1 535 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 CKMT1AP12532 417 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 RHCEP18577 417 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 MAOAP21397 527 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 STT3AP46977 705 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 AVPR1BP47901 424 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 EMDP50402 254 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 CDH12P55289 794 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SKP1P63208 163 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SPIBQ01892 262 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SLC13A2Q13183 592 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 KCNAB2Q13303 367 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 GNA13Q14344 377 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 ANGPT1Q15389 498 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 EXOC3L2Q2M3D2 409 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 ARHGAP11BQ3KRB8 267 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 CCNJQ5T5M9 372 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 MLIPQ5VWP3 458 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 TYW3Q6IPR3 259 aaKnown RBP6.85□□□□□ -1.31
SPG11-204ENST00000557866 TCEAL6Q6IPX3 200 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 NIPAL1Q6NVV3 410 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 ZCCHC12Q6PEW1 402 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 FRRS1Q6ZNA5 592 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 TTLL10Q6ZVT0 673 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 COX15Q7KZN9 410 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 GALNT5Q7Z7M9 940 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 VRK2Q86Y07 508 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 TMEM151BQ8IW70 566 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 ST13P4Q8IZP2 240 aaPredicted RBP6.85□□□□□ -1.31
SPG11-204ENST00000557866 OFCC1Q8IZS5 231 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SLC5A8Q8N695 610 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 CHDHQ8NE62 594 aaPredicted RBP6.85□□□□□ -1.31
SPG11-204ENST00000557866 OR4D9Q8NGE8 314 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 OR52J3Q8NH60 311 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 VANGL1Q8TAA9 524 aaPredicted RBP6.85□□□□□ -1.31
SPG11-204ENST00000557866 IFI44Q8TCB0 444 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 ADAMTS15Q8TE58 950 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 ADAMTS18Q8TE60 1221 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 PIK3R3Q92569 461 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 TCEAL3Q969E4 200 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SDCCAG3Q96C92 435 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 RDH12Q96NR8 316 aa6.85□□□□□ -1.31
SPG11-204ENST00000557866 SDF2Q99470 211 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms