RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 RUNX3Q13761 415 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 NDUFA9Q16795 377 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 PLK5Q496M5 336 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 TMEM35AQ53FP2 167 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 KLHL22Q53GT1 634 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 GALNT12Q8IXK2 581 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 DTX3Q8N9I9 347 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 CCL4L1Q8NHW4 92 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 NACC2Q96BF6 587 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 EFHD2Q96C19 240 aaPredicted RBP16.58■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF764Q96H86 408 aaPredicted RBP16.58■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF681Q96N22 645 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 KXD1Q9BQD3 176 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 MED20Q9H944 212 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 FGF22Q9HCT0 170 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 NPIPA5A0A0B4J1W7 369 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 MEIOCA2RUB1 952 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF860A6NHJ4 632 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 CD8B2A6NJW9 211 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 NPIPA7E9PJI5 369 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 IL1AP01583 271 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 NPIPA8P0DM63 369 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 CD8BP10966 210 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 IGFALSP35858 605 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 RACK1P63244 317 aaKnown RBP16.57■□□□□ 0.24
XRCC3-218ENST00000557439 TRAM2Q15035 370 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 P2RY14Q15391 338 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 RPE65Q16518 533 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 TJAP1Q5JTD0 557 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 TMEM64Q6YI46 380 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 HSDL2Q6YN16 418 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 PLEKHM3Q6ZWE6 761 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 RAB43Q86YS6 212 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 TRIM48Q8IWZ4 208 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 GNPDA2Q8TDQ7 276 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 GIMAP5Q96F15 307 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 ST6GAL2Q96JF0 529 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 TBX5Q99593 518 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 TTYH2Q9BSA4 534 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 CLCA2Q9UQC9 943 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 LIPT1Q9Y234 373 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 A0A0B4J293 547 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 HRO43593 1189 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 HYAL3O43820 417 aaPredicted RBP16.57■□□□□ 0.24
XRCC3-218ENST00000557439 HPGDSO60760 199 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF888P0CJ79 500 aaPredicted RBP16.57■□□□□ 0.24
XRCC3-218ENST00000557439 SLC1A3P43003 542 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 SLC9A3P48764 834 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 SIM1P81133 766 aaPredicted RBP16.57■□□□□ 0.24
XRCC3-218ENST00000557439 PRR5P85299 388 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 RAB40BQ12829 278 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 TSPAN31Q12999 210 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 MINDY4Q4G0A6 757 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 OR56A1Q8NGH5 318 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 UFD1Q92890 307 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 RNF31Q96EP0 1072 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 MSLNLQ96KJ4 702 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 WDFY2Q96P53 400 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 MCHR1Q99705 422 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 ARHGDIGQ99819 225 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 RPP25Q9BUL9 199 aaKnown RBP16.57■□□□□ 0.24
XRCC3-218ENST00000557439 NUFIP1Q9UHK0 495 aaKnown RBP16.57■□□□□ 0.24
XRCC3-218ENST00000557439 NDRG2Q9UN36 371 aaKnown RBP16.57■□□□□ 0.24
XRCC3-218ENST00000557439 PCDHGB2Q9Y5G2 931 aa16.57■□□□□ 0.24
XRCC3-218ENST00000557439 CASKO14936 926 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 CASC3O15234 703 aaKnown RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 PRG2P13727 222 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 MPIP34949 423 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 SGCGQ13326 291 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 AGERQ15109 404 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 TBRG1Q3YBR2 411 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 SLC25A30Q5SVS4 291 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 PDZK1Q5T2W1 519 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 RNLSQ5VYX0 342 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF544Q6NX49 715 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 QSOX2Q6ZRP7 698 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 RTL10Q7L3V2 364 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 GDF7Q7Z4P5 450 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 VN1R4Q7Z5H5 301 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF513Q8N8E2 541 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 FYTTD1Q96QD9 318 aaKnown RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 PITHD1Q9GZP4 211 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 ENKD1Q9H0I2 346 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 PLSCR3Q9NRY6 295 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 H0Y8X5 98 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 CACNB4O00305 520 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 SLC30A4O14863 429 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 IDH3BO43837 385 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 GKN3PP0CG01 181 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 GSTM3P21266 225 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 UBE3AQ05086 875 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF155Q12901 538 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 SLC35F1Q5T1Q4 408 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 SMARCD3Q6STE5 483 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 IL17RCQ8NAC3 791 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 ADAMTS15Q8TE58 950 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 SMAP2Q8WU79 429 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 TP53INP1Q96A56 240 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 SAMD8Q96LT4 415 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms