RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 GPR78Q96P69 363 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 NODALQ96S42 347 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 BDH2Q9BUT1 245 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 BRF2Q9HAW0 419 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 NMRK1Q9NWW6 199 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 ELOVL5Q9NYP7 299 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 ZNF226Q9NYT6 803 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 GRHL1Q9NZI5 618 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 MAT2BQ9NZL9 334 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 PACSIN3Q9UKS6 424 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 TESMINQ9Y4I5 508 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 PCDHA9Q9Y5H5 950 aa7.85□□□□□ -1.15
VRK1-206ENST00000557222 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 A0A1W2PNV4 684 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 A0A1W2PPR1 153 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 A0A1W2PS29 197 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 PRAMEF25A6NGN4 478 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 FRG2CA6NGY1 282 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 STX16-NPEPL1H3BU86 382 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 PLOD2O00469 737 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 OR7A17O14581 309 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 STX16O14662 325 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 CTIFO43310 598 aaKnown RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 SMPD2O60906 423 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 UGT2B11O75310 529 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 TNFSF13O75888 250 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 CBX7O95931 251 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 RBP1P09455 135 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 ZNF708P17019 499 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 MAPK12P53778 367 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 EEFSECP57772 596 aaKnown RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 MRPS22P82650 360 aaKnown RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 HMGCS1Q01581 520 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 GUCY2DQ02846 1103 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 PLCXD2Q0VAA5 305 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 TAOK1Q7L7X3 1001 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 LUZP2Q86TE4 346 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 IFNEQ86WN2 208 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 PRR22Q8IZ63 422 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 ZNF675Q8TD23 568 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 RNF138Q8WVD3 245 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 SLC44A1Q8WWI5 657 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 INTS12Q96CB8 462 aaKnown RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 COL21A1Q96P44 957 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 BTBD9Q96Q07 612 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 SLC39A3Q9BRY0 314 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 G6PC3Q9BUM1 346 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 FAIM2Q9BWQ8 316 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 ITPAQ9BY32 194 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 SHCBP1LQ9BZQ2 653 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 NOL11Q9H8H0 719 aaKnown RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 SERHLQ9NQF3 203 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 MBNL3Q9NUK0 354 aaKnown RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 TAS2R10Q9NYW0 307 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 KLRF1Q9NZS2 232 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 BCAP29Q9UHQ4 241 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 DTX4Q9Y2E6 619 aa7.84□□□□□ -1.15
VRK1-206ENST00000557222 GPR55Q9Y2T6 319 aaPredicted RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 UTP11Q9Y3A2 253 aaKnown RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 ANK3Q12955 4377 aaKnown RBP7.84□□□□□ -1.15
VRK1-206ENST00000557222 A0A096LPK6 155 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 RAD51CO43502 376 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 ZIC3O60481 467 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 SLITRK5O94991 958 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 LY6G6DO95868 133 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 GBAP04062 536 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 RNASE1P07998 156 aaKnown RBP7.83□□□□□ -1.16
VRK1-206ENST00000557222 PEPDP12955 493 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 HSD3B1P14060 373 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 PAX1P15863 534 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 CRYGSP22914 178 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 HSD3B2P26439 372 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 TYK2P29597 1187 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 CD79BP40259 229 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 EMDP50402 254 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 SERPINB8P50452 374 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 PNLIPRP2P54317 469 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 PLTPP55058 493 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 DSCR4P56555 118 aaPredicted RBP7.83□□□□□ -1.16
VRK1-206ENST00000557222 CLDN18P56856 261 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 ETF1P62495 437 aaKnown RBP7.83□□□□□ -1.16
VRK1-206ENST00000557222 IRF9Q00978 393 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 SRYQ05066 204 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 TRAF3Q13114 568 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 ACKR1Q16570 336 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 NKPD1Q17RQ9 610 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 Q5PR19 223 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 MROH9Q5TGP6 573 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 TTC19Q6DKK2 380 aaPredicted RBP7.83□□□□□ -1.16
VRK1-206ENST00000557222 FAM111BQ6SJ93 734 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 CHMP1BQ7LBR1 199 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 COMMD6Q7Z4G1 85 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 MILR1Q7Z6M3 343 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 GRAMD2AQ8IUY3 354 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 SPATA4Q8NEY3 305 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 OR52R1Q8NGF1 315 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 CAVIN3Q969G5 261 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 TM4SF18Q96CE8 201 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 STARD4Q96DR4 205 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms