RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 TMEM81Q6P7N7 255 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 NCCRP1Q6ZVX7 275 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-207ENST00000556831 TRILQ7L0X0 811 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 SPATA19Q7Z5L4 167 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 FGD2Q7Z6J4 655 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 CHERPQ8IWX8 916 aaKnown RBP12.9□□□□□ -0.34
SLIRP-207ENST00000556831 COX18Q8N8Q8 333 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 FBXO30Q8TB52 745 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 HGDQ93099 445 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 CCDC120Q96HB5 630 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 NODALQ96S42 347 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 ZBTB18Q99592 522 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 LMF2Q9BU23 707 aaKnown RBP12.9□□□□□ -0.34
SLIRP-207ENST00000556831 SDHAF3Q9NRP4 125 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 FAF1Q9UNN5 650 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-207ENST00000556831 C15orf41Q9Y2V0 281 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 NCKAP5O14513 1909 aa12.9□□□□□ -0.35
SLIRP-207ENST00000556831 DIDO1Q9BTC0 2240 aaKnown RBP12.89□□□□□ -0.35
SLIRP-207ENST00000556831 E9PLN8 166 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 KLF11O14901 512 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 ICOSLGO75144 302 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 PSMG1O95456 288 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 C6orf47O95873 294 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 IGHG3P01860 377 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 COL8A1P27658 744 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 KIR3DL1P43629 444 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 TRPC1P48995 793 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 DIO3P55073 304 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 C21orf58P58505 322 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 TTMPQ5BVD1 217 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 ANXA8L1Q5VT79 327 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 TMEM211Q6ICI0 200 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 ZCCHC12Q6PEW1 402 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 MAMDC2Q7Z304 686 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-207ENST00000556831 WDR53Q7Z5U6 358 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-207ENST00000556831 PIWIL2Q8TC59 973 aaKnown RBP12.89□□□□□ -0.35
SLIRP-207ENST00000556831 ZNF75CPQ92670 426 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-207ENST00000556831 RMND5BQ96G75 393 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-207ENST00000556831 VKORC1Q9BQB6 163 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 TBL1XR1Q9BZK7 514 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 HHATLQ9HCP6 504 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 GALNT9Q9HCQ5 603 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 ACKR4Q9NPB9 350 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 INTS9Q9NV88 658 aaKnown RBP12.89□□□□□ -0.35
SLIRP-207ENST00000556831 COQ3Q9NZJ6 369 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 PPP4R1LQ9P1A2 415 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 DKKL1Q9UK85 242 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 ABCG2Q9UNQ0 655 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 MEMO1Q9Y316 297 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 PCDHGB3Q9Y5G1 929 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 WIF1Q9Y5W5 379 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 LIPGQ9Y5X9 500 aa12.89□□□□□ -0.35
SLIRP-207ENST00000556831 GOLGA8QA0A0J9YX86 632 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 GOLGA8OA6NCC3 632 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 GOLGA8NF8WBI6 632 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 SNPHO15079 494 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 SCO2O43819 266 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 TSPAN2O60636 221 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 CBR3O75828 277 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 SOX30O94993 753 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 CLDN1O95832 211 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 CELA3AP09093 270 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 RFPL3SP0C7P2 107 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 CYP4B1P13584 511 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 HPGDP15428 266 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 EPHA3P29320 983 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 EVI2BP34910 448 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 CCT3P49368 545 aaKnown RBP12.88□□□□□ -0.35
SLIRP-207ENST00000556831 PPP2R2AP63151 447 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 OCRLQ01968 901 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 GAB1Q13480 694 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 LASP1Q14847 261 aaKnown RBP12.88□□□□□ -0.35
SLIRP-207ENST00000556831 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 DESI1Q6ICB0 168 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 OGFOD2Q6N063 350 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 MFSD12Q6NUT3 480 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 ZNF585AQ6P3V2 769 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 C3P1Q6ZMU1 363 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 ACAD11Q709F0 780 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 CAMKMTQ7Z624 323 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 MRGPRGQ86SM5 289 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 DOLPP1Q86YN1 238 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 WDR75Q8IWA0 830 aaKnown RBP12.88□□□□□ -0.35
SLIRP-207ENST00000556831 RIMKLAQ8IXN7 391 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 ZNF808Q8N4W9 903 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-207ENST00000556831 OR4K17Q8NGC6 315 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 OR4N2Q8NGD1 307 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 OR4A15Q8NGL6 344 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 OR14L1PQ8NHC6 308 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 SFXN5Q8TD22 340 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 COQ8BQ96D53 544 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
SLIRP-207ENST00000556831 GNRHR2Q96P88 292 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 SH3GL2Q99962 352 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 G6PC3Q9BUM1 346 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 SLC6A15Q9H2J7 730 aa12.88□□□□□ -0.35
SLIRP-207ENST00000556831 PROK2Q9HC23 129 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms